HHsearch alignment for GI: 254780784 and conserved domain: PRK06299

>PRK06299 rpsA 30S ribosomal protein S1; Reviewed.
Probab=99.65  E-value=6.5e-16  Score=148.12  Aligned_cols=77  Identities=35%  Similarity=0.589  Sum_probs=45.4

Q ss_pred             CCCCCEEEEEEEEEEECCEEEECCCCCCEEEEEEECCCCCCCCHHHHCCCCCEEEEEEEEECC-CCCEEEEEEECCCC
Q ss_conf             546867899999994153699828797104886631444547855603259889999997868-99866687304778
Q gi|254780784|r  617 PEVNKIYKGQVVKVMDFGAFVHFCGARDGLVHISQLSTERVAKTSDVVKEGDTVWVKLLDFDD-RGKIKLSMKVVDQN  693 (699)
Q Consensus       617 ~e~g~~y~~~v~~i~~fGafve~~~g~~gl~HiS~l~~~~v~~~~d~~~~Gd~i~vk~~~~d~-~g~i~lSrk~~~~~  693 (699)
T Consensus       448 ~k~G~iv~g~V~~i~~~G~fV~l~~gieglI~~sels~~~~~~~~~~~~~Gd~v~~~Ii~id~e~rkI~LSiK~le~~  525 (556)
T PRK06299        448 HKKGSIVTGTVTEVKDKGAFVELADGVEGFIRASELSRDRVEDATEVLKVGDEVEAKVINIDRKNRRISLSIKALDEA  525 (556)
T ss_pred             CCCCCEEEEEEEEEECCCEEEEECCCEEEEEEHHHCCCHHHHCCCCCCCCCCEEEEEEEEECCCCCEEEEEHHHHHHH
T ss_conf             899899999999997895699938990999997996800233621116899989999999827779999871595555