HHsearch alignment for GI: 254780784 and conserved domain: PRK12442
>PRK12442 translation initiation factor IF-1; Reviewed.
Probab=92.97 E-value=0.64 Score=26.18 Aligned_cols=64 Identities=22% Similarity=0.275 Sum_probs=49.9
Q ss_pred EEEEEEEEEEECCEE-EECCCCCCEEEEEEE-CCCCCCCCHHHHCCCCCEEEEEEEEECC-CCCEEEEEEEC
Q ss_conf 789999999415369-982879710488663-1444547855603259889999997868-99866687304
Q gi|254780784|r 622 IYKGQVVKVMDFGAF-VHFCGARDGLVHISQ-LSTERVAKTSDVVKEGDTVWVKLLDFDD-RGKIKLSMKVV 690 (699)
Q Consensus 622 ~y~~~v~~i~~fGaf-ve~~~g~~gl~HiS~-l~~~~v~~~~d~~~~Gd~i~vk~~~~d~-~g~i~lSrk~~ 690 (699)
T Consensus 8 e~eG~V~e~lpn~~FrV~LeNg~~Vla~~sGKmR~~~Ir-----Il~GD~V~VElSpYDltkGRIvyR~k~~ 74 (87)
T PRK12442 8 ELDGIVDEVLPDSRYRVTLENGVEVGAYASGRMRKHRIR-----ILAGDRVTLELSPYDLTKGRINFRHKDE 74 (87)
T ss_pred EEEEEEEEECCCCEEEEEECCCCEEEEEEECCEEEEEEE-----ECCCCEEEEEECCCCCCCEEEEEEECCC
T ss_conf 987899998799879999779989999985501330277-----7689989999887778874899884788