HHsearch alignment for GI: 254780784 and conserved domain: PRK12442

>PRK12442 translation initiation factor IF-1; Reviewed.
Probab=92.97  E-value=0.64  Score=26.18  Aligned_cols=64  Identities=22%  Similarity=0.275  Sum_probs=49.9

Q ss_pred             EEEEEEEEEEECCEE-EECCCCCCEEEEEEE-CCCCCCCCHHHHCCCCCEEEEEEEEECC-CCCEEEEEEEC
Q ss_conf             789999999415369-982879710488663-1444547855603259889999997868-99866687304
Q gi|254780784|r  622 IYKGQVVKVMDFGAF-VHFCGARDGLVHISQ-LSTERVAKTSDVVKEGDTVWVKLLDFDD-RGKIKLSMKVV  690 (699)
Q Consensus       622 ~y~~~v~~i~~fGaf-ve~~~g~~gl~HiS~-l~~~~v~~~~d~~~~Gd~i~vk~~~~d~-~g~i~lSrk~~  690 (699)
T Consensus         8 e~eG~V~e~lpn~~FrV~LeNg~~Vla~~sGKmR~~~Ir-----Il~GD~V~VElSpYDltkGRIvyR~k~~   74 (87)
T PRK12442          8 ELDGIVDEVLPDSRYRVTLENGVEVGAYASGRMRKHRIR-----ILAGDRVTLELSPYDLTKGRINFRHKDE   74 (87)
T ss_pred             EEEEEEEEECCCCEEEEEECCCCEEEEEEECCEEEEEEE-----ECCCCEEEEEECCCCCCCEEEEEEECCC
T ss_conf             987899998799879999779989999985501330277-----7689989999887778874899884788