HHsearch alignment for GI: 254780784 and conserved domain: PRK13763
>PRK13763 putative RNA-processing protein; Provisional.
Probab=96.69 E-value=0.0032 Score=44.84 Aligned_cols=61 Identities=33% Similarity=0.443 Sum_probs=54.3
Q ss_pred CEEEEECCCCHHHHHHHHHHCCEEEEECCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCCEEE
Q ss_conf 500003786077998999868889980880899996898999999999998524754686789
Q gi|254780784|r 562 QIRNVIGMGGKVIRGIVEQTGAKVNIDDDGTVKIASSSLAEIEAAREMIRSITDVPEVNKIYK 624 (699)
Q Consensus 562 ki~~~iG~gG~~ik~i~~~~~~~i~i~d~g~v~i~~~~~~~~~~a~~~i~~~~~~~e~g~~y~ 624 (699)
T Consensus 105 ~~gRIIG~~Gktr~~IE~lT~t~I~V~g~t-V~IiG-~~~~i~~Ar~AI~~Li~Gs~h~~Vy~ 165 (185)
T PRK13763 105 IKGRIIGEGGKTRRIIEELTGVKISVYGKT-VAIIG-DPEQVEIAREAIEMLIEGAPHGTVYK 165 (185)
T ss_pred HHHHHCCCCCHHHHHHHHHHCCEEEEECCE-EEEEC-CHHHHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 987870899539999999878779982889-99976-88888999999999976998177999