HHsearch alignment for GI: 254780784 and conserved domain: TIGR02696

>TIGR02696 pppGpp_PNP guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; InterPro: IPR014069 The of the characterization of two proteins from Streptomyces coelicolor ahs been presented . The protein in this family was shown to have poly(A) polymerase activity and may be responsible for polyadenylating RNA in this species. It has also been shown that a nearly identical plasmid-encoded protein from Streptomyces antibioticus is a bifunctional enzyme that acts also as a guanosine pentaphosphate synthetase ..
Probab=98.70  E-value=1.3e-08  Score=88.78  Aligned_cols=203  Identities=21%  Similarity=0.399  Sum_probs=166.0

Q ss_pred             EEEEEEECEECCCCCCEEEEEECCCEEEEEEEECCCCC-CCCCCC-C-----CEEEEECCCCCCCCCCCCCCCCCCCCCH
Q ss_conf             89999914004546728999978948999997278888-777735-4-----0686652320133678887357898871
Q gi|254780784|r   14 RPLKLETGRIARQSDGAVLATYGETVVLATVVYDRSLK-DGQDFF-P-----LTVNYQERTYAVGKIPGGYLRRESRPTE   86 (699)
Q Consensus        14 r~i~~ETGklArqA~GsV~v~~G~T~VLaTv~~~~~~~-~~~dFf-P-----LtVdY~Ek~yAaGkIPGgF~kREgrpsd   86 (699)
T Consensus       352 r~l~~ev~~~Pr-~hGsa~f~rGetq~lGv~tl~ml~m~q~~d~l~P~~~~ry~h~yn~PPys~Ge~-----GrvG~Pkr  425 (725)
T TIGR02696       352 RSLSAEVEVIPR-VHGSALFERGETQILGVTTLNMLKMEQQIDSLSPVTSKRYLHHYNFPPYSTGET-----GRVGSPKR  425 (725)
T ss_pred             HHHHCCEEEECC-CCCHHHHHCCCEEEEHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCC-----CCCCCCCC
T ss_conf             521000024133-101023205760354034778888876553116202300110037887566764-----56688753


Q ss_pred             HHHHHHHHHHCCCCCCCC--CCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCCC----
Q ss_conf             453111123212677674--68868837899998218888778999999999987326882354112355204773----
Q gi|254780784|r   87 NEILISRMIDRSIRPLFS--KCYKNETQVIINVMQHDLESSPHVVSMVAASAALMLSGLPFEGPVVGAQVDYINGQ----  160 (699)
Q Consensus        87 ~EiL~sRlIDR~lRPLFP--kgf~~evQIv~~VLS~D~~~dpdvlAi~aASaAL~ISdIPf~GPVaaVRVG~idge----  160 (699)
T Consensus       426 reiGhG~laeral~PvlP~~e~fPyair~vseal~snGsts--mGsvCastl~l~~aGvPl~~~vaGiamGl~~~~~~~~  503 (725)
T TIGR02696       426 REIGHGALAERALVPVLPSREEFPYAIRQVSEALGSNGSTS--MGSVCASTLSLLNAGVPLKAPVAGIAMGLISDEVDGE  503 (725)
T ss_pred             CCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC--HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCC
T ss_conf             20256502211000344676656368999988741577630--3578999999986488620002012222222200354


Q ss_pred             --EEECCCC---CCCCCCCEEEEEECCCCHHHHHCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             --2436850---0022210135530544323331244--43248999988753168899999999999998
Q gi|254780784|r  161 --YVLNPRL---DEDQGSLDLFVSGTQDAVLMVELEA--NQLSEDVVLDAIIFGHNECKPVIEAISKLAKM  224 (699)
Q Consensus       161 --~ViNPt~---ee~esdLDLvVAGT~d~IlMIE~~A--~EVsEe~mleAI~~Ahe~Ik~iI~~Q~eL~~~  224 (699)
T Consensus       504 ~~y~~ltdi~Gaeda~GdmdfkvaGt~~~~talqldtkldGiP~~vla~al~~a~~ar~~il~~~~~~i~~  574 (725)
T TIGR02696       504 TRYVALTDILGAEDALGDMDFKVAGTREFVTALQLDTKLDGIPAEVLAEALKQAKDARLAILDVLAEAIDT  574 (725)
T ss_pred             EEEEEEEECCCCCCCCCCCCEEECCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             25676420113201025532122144787777753100257647899999998898899999999998507