RPSBLAST alignment for GI: 254780784 and conserved domain: TIGR00717

>gnl|CDD|162009 TIGR00717, rpsA, ribosomal protein S1. This model provides trusted hits to most long form (6 repeat) examples of RpsA. Among homologs with only four repeats are some to which other (perhaps secondary) functions have been assigned. Length = 516

 Score = 54.7 bits (132), Expect = 8e-08
 Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 1/71 (1%)

Query: 619 VNKIYKGQVVKVMDFGAFVHFCGARDGLVHISQLSTERVAKTSDVVKEGDTVWVKLLDFD 678
           V  + KG+V ++ DFGAFV   G  +GL+  S+LS  R    +D +K GD V  K++D D
Sbjct: 446 VGSVVKGKVTEIKDFGAFVELPGGVEGLIRNSELSENRDEDKTDEIKVGDEVEAKVVDID 505

Query: 679 -DRGKIKLSMK 688
               K+ LS+K
Sbjct: 506 KKNRKVSLSVK 516