RPSBLAST alignment for GI: 254780784 and conserved domain: COG0689
>gnl|CDD|31033 COG0689, Rph, RNase PH [Translation, ribosomal structure and biogenesis]. Length = 230
Score = 96.9 bits (241), Expect = 2e-20
Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 16/239 (6%)
Query: 307 MLDKKVRMDGRDSETVRDISAQVGLLQRTHGSSLFIRGDTQAIVVVTLGTREDEQYVDSL 366
+ +R DGR + +R I G+L+ GSSL G+T+ I V+ G RE L
Sbjct: 3 ESEDGMRPDGRKPDELRPIKITRGVLKHAEGSSLIEFGNTKVICTVS-GPREPVPR--FL 59
Query: 367 SGTQRNDFMMHYNFLPCATGEVSRMGAPSRREIGHGRLARRAIHPVLPQTAQFPYTLRIV 426
GT + Y LP +T E + A R RL RA+ V+ P + +
Sbjct: 60 RGTGKGWLTAEYGMLPRSTDERKKREADRGRTKEISRLIGRALRAVI-DLELLPESTIDI 118
Query: 427 S-EITESDGSSSMATVCGSSLALMDAGVPISKPVAGIAMGLVKDGDDFIILSDISGDEDH 485
++ ++DG + A++ G+SLAL DAG+P+ VA I++G+V I+ D+ +ED
Sbjct: 119 DCDVLQADGGTRTASITGASLALADAGIPLRDLVAAISVGIVDGV----IVLDLDYEEDS 174
Query: 486 LGHMDFKVAGTDSG----ITAMQMDMKIGGISENIMVMALQQAKRGRLHILNEMSKVLS 540
D V T +G I + D G +E+ ++ L A +G + + L+
Sbjct: 175 AAEADMNVVMTGNGGLVEIQGLAED---GPFTEDELLELLDLAIKGCNELRELQREALA 230