RPSBLAST alignment for GI: 254780784 and conserved domain: KOG1069

>gnl|CDD|36287 KOG1069, KOG1069, KOG1069, Exosomal 3'-5' exoribonuclease complex, subunit Rrp46 [Translation, ribosomal structure and biogenesis]. Length = 217

 Score = 51.5 bits (123), Expect = 8e-07
 Identities = 52/229 (22%), Positives = 91/229 (39%), Gaps = 24/229 (10%)

Query: 319 SETVRDISAQVGLLQRTHGSSLFIRGDTQAIVVVTLGTREDEQYVDSLSGTQRNDFMMHY 378
           +E +R I+ ++ +L R  GSS F +GDT+ I  V  G  +            R +     
Sbjct: 2   AERLRGIACEISILSRPDGSSEFSQGDTKVICSVY-GPID---------VKARQED---- 47

Query: 379 NFLPCATGEVS---RMGAPSRREIGHGRLARRAIHPVLPQTAQFPYTL-RIVSEITESDG 434
                AT EV    + G     E    R+ R+ +   +     +P T  ++  ++ E DG
Sbjct: 48  --PEKATLEVIWRPKSGVNGTVEKVLERIIRKTLSKAIILEL-YPRTTIQVSIQVVEDDG 104

Query: 435 SSSMATVCGSSLALMDAGVPISKPVAGIAMGLVKDGDDFIILSDISGDE-DHLGHMDFKV 493
           S+    +  + LAL+DAG+P+      I+  L +DG   ++L   +  E           
Sbjct: 105 STLACAINAACLALVDAGIPLRSMFCAISCALHEDGV--LVLDPTAKQEKISTARATLSF 162

Query: 494 AGTDSGITAMQMDMKIGGISENIMVMALQQAKRGRLHILNEMSKVLSES 542
            G   G   + +    G  SE+ +   L+ A+     +     +VL   
Sbjct: 163 EGGSLGEPKVIISETNGEKSEDQLFYVLELAQAAAQSLFPFYREVLQRK 211