HHsearch alignment for GI: 254780786 and conserved domain: PRK00521

Probab=100.00  E-value=4.5e-32  Score=201.39  Aligned_cols=111  Identities=35%  Similarity=0.559  Sum_probs=101.7

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCC--CHHHHHHHHHHHHHHH
Q ss_conf             87777389999999999999999514134201265168988889858756559999827986--4778999999856899
Q gi|254780786|r    5 NPKNSRRALRVGEEVRSALMWVILNNEFQDRLISRDVISISEVCMSVDLRVATVYISLPLDV--SPDRVISALNCNIKFI   82 (128)
Q Consensus         5 ~~~~s~R~~rv~~~i~~~is~il~~~~~~d~~~~~~~vtIt~V~vS~Dl~~AkVyvs~~~~~--~~~~~~~~L~~~~~~i   82 (128)
T Consensus         1 mm~~s~R~~Rv~~~i~~~is~il~~-~~~d~~~~--~vtIt~V~vS~DL~~AkVy~s~~~~~~~~~~~~~~~L~~~~~~i   77 (114)
T PRK00521          1 MMKESQRALRVAEQIRRELAEILQR-EIKDPRLG--MVTVTDVEVSPDLAHAKVYVTVLGDDEEDVEEALAALKKAAGFL   77 (114)
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHH-HCCCCCCC--EEEEEEEEECCCHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHH
T ss_conf             9862467899999999999999998-67586668--06886999885735515667866897544999999999979999


Q ss_pred             HHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHCC
Q ss_conf             9999998752145785899973868889999998557
Q gi|254780786|r   83 RGRIGRSLRNLRYVPELRFRYDTSLQSYWKLNALMCL  119 (128)
Q Consensus        83 r~~l~~~l~~lr~~P~L~F~~D~s~e~~~~I~~LL~~  119 (128)
T Consensus        78 r~~l~~~l-~lr~~P~L~F~~D~s~e~~~~I~~lL~e  113 (114)
T PRK00521         78 RSELGKRL-RLRKVPELRFVYDESLEYGMRIDELLRQ  113 (114)
T ss_pred             HHHHHHHC-CCCCCCEEEEEECCCHHHHHHHHHHHHH
T ss_conf             99998654-6662772799816977899999999960