PSIBLAST alignment of GI: 254780786 and protein with PDB id: 1jos

gi|33357151|pdb|1JOS|A Chain A, Ribosome Binding Factor A(Rbfa) Length = 128

 Score =  104 bits (260), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 32/127 (25%), Positives = 67/127 (52%), Gaps = 8/127 (6%)

Query: 5   NPKNSRRALRVGEEVRSALMWVILNNEFQDRLISRDVISISEVCMSVDLRVATVYISLPL 64
             +  +R+ RV +E++  +  ++   E +D  I   ++++S+V +S DL  A ++++   
Sbjct: 1   MAREFKRSDRVAQEIQKEIAVILQR-EVKDPRIG--MVTVSDVEVSSDLSYAKIFVTFLF 57

Query: 65  DVSP---DRVISALNCNIKFIRGRIGRSLRNLRYVPELRFRYDTSLQSYWKLNALMCLPK 121
           D      ++ +  L     +IR  +G+++R LR VPE+RF YD SL    +++ L+    
Sbjct: 58  DHDEMAIEQGMKGLEKASPYIRSLLGKAMR-LRIVPEIRFIYDQSLVEGMRMSNLVTNV- 115

Query: 122 IPVALEK 128
           +    +K
Sbjct: 116 VREDEKK 122