RPSBLAST alignment of GI: 254780786 and protein with PDBid: 1jos
>1jos_A RBFA, ribosome-binding factor A; RNA binding protein, structure 2 function project, S2F, structural genomics; 1.70A {Haemophilus influenzae} SCOP: d.52.7.1 PDB: 1kkg_A Length = 128
Score = 81.0 bits (200), Expect = 7e-17
Identities = 34/114 (29%), Positives = 63/114 (55%), Gaps = 7/114 (6%)
Query: 6 PKNSRRALRVGEEVRSALMWVILNNEFQDRLISRDVISISEVCMSVDLRVATVYISLPLD 65
+ +R+ RV +E++ + VIL E +D I +++S+V +S DL A ++++ D
Sbjct: 2 AREFKRSDRVAQEIQKEIA-VILQREVKDPRIGM--VTVSDVEVSSDLSYAKIFVTFLFD 58
Query: 66 VSP---DRVISALNCNIKFIRGRIGRSLRNLRYVPELRFRYDTSLQSYWKLNAL 116
++ + L +IR +G+++R LR VPE+RF YD SL +++ L
Sbjct: 59 HDEMAIEQGMKGLEKASPYIRSLLGKAMR-LRIVPEIRFIYDQSLVEGMRMSNL 111