HHsearch alignment for GI: 254780787 and conserved domain: CHL00071

Probab=100.00  E-value=3.8e-36  Score=265.23  Aligned_cols=237  Identities=27%  Similarity=0.309  Sum_probs=164.8

Q ss_pred             CCCCCE-EEEEECCCCCHHHHHHHHHHHHH----------------HHCCCCCCEECCCEEEEECCCCEEEEEECCCHHH
Q ss_conf             255303-89862368504467778864222----------------1001231000121499951784388885166157
Q gi|254780787|r  380 DIRPPV-VTIMGHVDHGKTSLLDAIRKADV----------------AKGEIGGITQHIGAYQVAYQGKNITFLDTPGHAA  442 (884)
Q Consensus       380 ~~R~pv-v~v~ghvd~GKt~lld~~r~~~~----------------~~~e~ggitq~iga~~~~~~~~~~~~iDtPGh~~  442 (884)
T Consensus         8 ~~k~~vni~~~GHVD~GKSTL~g~L~~~~~~~~~~~~~~~~~~D~~~eEr~rGiTid~~~~~~et~~~~~~~iD~PGH~~   87 (409)
T CHL00071          8 RKKPHVNIGTIGHVDHGKTTLTAAITMTLAANGGAKGKKYDEIDSAPEEKARGITINTAHVEYETENRHYAHVDCPGHAD   87 (409)
T ss_pred             CCCCEEEEEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHCCCEEEECEEEEECCCEEEEEEECCCHHH
T ss_conf             89986999999545883999999986453004513343155323797687369448802489962875999986796789


Q ss_pred             HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCC-EEEECCCCCCCCCCCCH---HHHHHHCCCCCCCCCCC
Q ss_conf             899986664206805999983667402357778989970994-15612331244332000---22100001320001234
Q gi|254780787|r  443 FYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVS-IIVAINKIDKLGADPQK---VRMSLLKHDVFVESMGG  518 (884)
Q Consensus       443 f~~~r~rg~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p-~iva~nk~d~~~~~~~~---~~~~~~~~~~~~~~~~~  518 (884)
T Consensus        88 fv~nmi~Gas~aD~alLVV~A~~G~~~QTkEHl~l~~~lgV~~~IVavnKmD~v~-~~~~~e~i~~~i~~~l~~~g~~~~  166 (409)
T CHL00071         88 YVKNMITGAAQMDGAILVVSAADGPMPQTKEHILLAKQVGVPNIVVFLNKEDQVD-DEELLELVELEVRELLDKYDFPGD  166 (409)
T ss_pred             HHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCC-HHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf             9999875230158128999868788500499999999739993655555679854-899999999999999997399845


Q ss_pred             CCEEEEEEECCCCCCCCC-----------CCCH-HCCCCCCC----CCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCH
Q ss_conf             740363110024774112-----------2100-00233334----2000348666416777886377620000000000
Q gi|254780787|r  519 DILDVEISAKNNLNLDKL-----------LDAI-LLQAEMLD----LKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGT  582 (884)
Q Consensus       519 ~~~~~~~~~~~~~~~~~~-----------~~~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  582 (884)
T Consensus       167 ~i~~vp~sa~~~~~~~~~~~~~~~~~~~w~~~~~~Ll~~l~~~~p~~~r~~~~p~r~~Id~vf~v~G~GtVv~G~v~sG~  246 (409)
T CHL00071        167 EIPIVAGSALLALEALIENPKIKRGENKWVDKIYNLMDAVDSYIPTPERDTDKPFLMAIEDVFSITGRGTVATGRIERGT  246 (409)
T ss_pred             CCEEEECCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEEECCCCEEEEEEEEEECC
T ss_conf             56089652133234312587545565612447999999887237788887677606442214753897889999991456


Q ss_pred             HHCCCCC-CCCCC---CCCCEECCCCCCCCCCCCCCCCCC
Q ss_conf             0000000-25665---554200014665322100001222
Q gi|254780787|r  583 LSKGNIL-VVGDQ---WGKIRALFNDRGQGISKAVPSMPI  618 (884)
Q Consensus       583 ~~~~~~~-~~~~~---~~~v~~~~~~~~~~~~~~~~~~~~  618 (884)
T Consensus       247 v~~Gd~v~i~~~~~~~~~~VksI~~-~~~~~~~a~aG~~v  285 (409)
T CHL00071        247 VKVGDTVEIVGLRETRTTTVTGLEM-FQKTLDEGLAGDNV  285 (409)
T ss_pred             CCCCCEEEEEECCCCCEEEEEEEEE-CCCCCCEECCCCEE
T ss_conf             3499989999769986079999998-89598888799889