HHsearch alignment for GI: 254780787 and conserved domain: CHL00189
>CHL00189 infB translation initiation factor 2; Provisional.
Probab=100.00 E-value=0 Score=1336.10 Aligned_cols=579 Identities=42% Similarity=0.669 Sum_probs=545.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-----HC
Q ss_conf 1111211111000012222221001345553024000234455356677666541011112221012333221-----01
Q gi|254780787|r 299 SREIVVPETITIQELSQRMSERSADVIKFLMKEGQIMKPGDVIDADLSEIIANEFGNTVKRVLESDIEVGIFD-----VA 373 (884)
Q Consensus 299 ~rev~ipE~itv~ELA~~m~~~~~evik~l~~~G~~~t~nq~lD~etaelva~E~g~ev~~~~~~~~~~~~~~-----~~ 373 (884)
T Consensus 183 p~~i~i~~~itv~ela~~~~~~~~eiIk~l~~~G~~~tiNq~ld~dt~~~ia~e~g~~~~~~~~~~~~~~~~~~~~~~~~ 262 (770)
T CHL00189 183 PESLIIDSPLTVQELAILLCISETEIIKSLFLKGISVTVNQILDISTISTVAEDFGINVDSQEQNNQNEKTVNISEINQF 262 (770)
T ss_pred CCEEEECCCEEHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCCC
T ss_conf 96699479668999998858998999999997696884265269999999999739888982342055544301012222
Q ss_pred CCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEC----CCCEEEEEECCCHHHHHHHHHH
Q ss_conf 241001255303898623685044677788642221001231000121499951----7843888851661578999866
Q gi|254780787|r 374 DSESDLDIRPPVVTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAYQVAY----QGKNITFLDTPGHAAFYEMRAR 449 (884)
Q Consensus 374 ~~~~~~~~R~pvv~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~~~~~----~~~~~~~iDtPGh~~f~~~r~r 449 (884)
T Consensus 263 ~~~~~l~~RpPVVTIMGHVDHGKTsLLD~iR~t~Va~~EaGGITQhIGAy~V~~~~~~~~~~ITFlDTPGHeAFt~MRaR 342 (770)
T CHL00189 263 KSTIHLIRRPPIVTILGHVDHGKTTLLDAIRKTNIAQKEAGGITQKIGAYEVEVPYKDQNQKIVFLDTPGHEAFSSMRSR 342 (770)
T ss_pred CCHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEECEEEEEECCCCCCCEEEEECCCCHHHHHHHHHC
T ss_conf 32210677899899857725772037888852885134567655503529997515788975899559946889999862
Q ss_pred HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 64206805999983667402357778989970994156123312443320002210000132000123474036311002
Q gi|254780787|r 450 GARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKN 529 (884)
Q Consensus 450 g~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (884)
T Consensus 343 GA~vTDIvILVVAADDGVmPQTiEAI~hakaA~VPiIVAINKiDkp~an~~rVk~eL~e~gli~EewGGd~~~V~ISAkt 422 (770)
T CHL00189 343 GANVTDIAILIVAADDGVKPQTIEAINHIQAANVPIIVAINKIDKENANIDRVKQELSKYNLISEKWGGQTPMIPISALQ 422 (770)
T ss_pred CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHCCCCEEEEEEEECC
T ss_conf 78666679999965788567279999999876998899987745899885789999998695522237955999966167
Q ss_pred CCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCEECCCCCCCCC
Q ss_conf 47741122100002333342000348666416777886377620000000000000000025665554200014665322
Q gi|254780787|r 530 NLNLDKLLDAILLQAEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKGNILVVGDQWGKIRALFNDRGQGI 609 (884)
Q Consensus 530 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 609 (884)
T Consensus 423 g~gId~LLE~IlL~AEvlELkAnp~~~A~GvVIES~ldkgrG~VATvLVQ~GTLkvGD~iVaG~~~GKVRaM~Dd~Gk~v 502 (770)
T CHL00189 423 GTNIDKLLEMILLLAEIENLQADPTQLAQGTILEAHLDKTKGPVATLLVQNGTLRIGDIIVAGTSLGKIRGMINSAGNKI 502 (770)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCEEEEEEECCEECCCCEEEECCCEEEEEEEECCCCCCC
T ss_conf 98879999999999878752368898614999997651686776899995484403999998363447889889999844
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
Q ss_conf 10000122211112347555540431242036689999999999999987766445657888852000123023344433
Q gi|254780787|r 610 SKAVPSMPIEVLGLQGMPMAGDKFGVVDSESRAREIAQYRQRVTRNKSMARRLGSHSALEKLVKNANISSKMKEFPVIIK 689 (884)
Q Consensus 610 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik 689 (884)
T Consensus 503 keA~PS~PVeIlGl~~vP~AGD~f~vv~sEk~Ak~ia~~r~~~~~~~~~~~------~sl~~l~~~~~e~~~k~LnlIIK 576 (770)
T CHL00189 503 NEAGPSSPVEIWGLSSVPATGEYFQVVNSEKEAKLKVIENPESNQKQTTSR------ITLDTPKTINSEDEKKQLNLIIK 576 (770)
T ss_pred CCCCCCCCEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH------CCHHHHHHHHHCCCCEEEEEEEE
T ss_conf 554899868987787898779889993799999999999999999977521------26555987863277407649999
Q ss_pred HHCCCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEHHHHH
Q ss_conf 31023123455542115765356578851268575778876432598799963899989999999839859975026789
Q gi|254780787|r 690 GDVQGSVEAIVDSLGALKNSEVCLSIVHSSVGAINETDVSLAKASGAVIFGFNVRASSQARVLAIKDEIKILYYKIIYDL 769 (884)
Q Consensus 690 ~d~~gs~eal~~~l~~~~~~ev~i~v~~~~VG~v~~~DV~~A~~~~a~Il~FnVkv~~~a~~~A~~~gV~I~~~~IIY~L 769 (884)
T Consensus 577 ADvqGSlEAI~~sL~kl~~~eV~v~II~sgVG~ITESDV~LA~aS~AiIIGFNVr~~~~ak~~Ae~~gV~Ir~y~IIY~L 656 (770)
T CHL00189 577 TDTQGSIEAILNSLSQIPQKKVQLNVLYSSPGEITETDVDLASTTNALIIAFNTNLAPGAKKAARKLNVDIREYDVIYDL 656 (770)
T ss_pred ECCCCCHHHHHHHHHHCCCCCEEEEEEEECCCCCCHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCHHHH
T ss_conf 17753099999999708988589999983215776636767650498899962798978999999759748991608889
Q ss_pred HHHHHHHHHHHCCCEEEEEEEEEEEEEEEEECCCCCCEEEEEEEEEEEECCCEEEEEECCEEEEEEEEHHHHHCCHHHHH
Q ss_conf 99999999630694047888878999788733898707899985217846980799669989982262576644600668
Q gi|254780787|r 770 LDSIKDSMSELLSPEIRETFLGNAEVLEVFAVTKLGNVAGCKVSEGKVERGSGVRLIRNSTVIYEGKLKTLKRFKDEVSE 849 (884)
Q Consensus 770 ~d~~~~~~~~~l~~~~~~~~~g~a~v~~vF~~~k~~~i~G~~V~~G~i~~~~~~~v~r~~~~i~~g~i~sl~~~k~~v~e 849 (884)
T Consensus 657 iDdvk~~m~glL~P~~~E~~iG~AeVr~vF~isK-g~IAGc~Vt~G~I~r~~~vRViR~~~vI~eG~I~SLKRfKddVkE 735 (770)
T CHL00189 657 VEDIEYSMEDLLDPEYDKVPIGEAEVQTVFSLAK-SFVAGCRVTSGKILKNAHIKVIRKNKLIFEGDINSLKRVKEDVEE 735 (770)
T ss_pred HHHHHHHHHCCCCCEEEEEEEEEEEEEEEEECCC-CEEEEEEEEECEEECCCCEEEEECCEEEEEEEEHHHHCCCCCCCH
T ss_conf 9999999845799706899989999999995289-669899998178963992799769989998076775003202023
Q ss_pred HHCCCEEEEEEECCEEEEECCEEEEEEEEEEEECC
Q ss_conf 72797669997284110058989998899985149
Q gi|254780787|r 850 VHAGQDCGMAFEKYDNIQAGDMIECFSIEHIKRSL 884 (884)
Q Consensus 850 v~~g~ecgi~~~~~~~~~~gD~i~~~~~~~~~~~l 884 (884)
T Consensus 736 V~~G~ECGI~l~~fnDik~GDiIE~ye~ve~~rtL 770 (770)
T CHL00189 736 VQEGNECGIFIEEFQLWQSGDKIEAFELIPKKRTL 770 (770)
T ss_pred HCCCCCCEEECCCCCCCCCCCEEEEEEEEEEECCC
T ss_conf 15994153770483437779899998999973049