HHsearch alignment for GI: 254780787 and conserved domain: COG1159
>COG1159 Era GTPase [General function prediction only].
Probab=99.59 E-value=1.5e-14 Score=117.49 Aligned_cols=160 Identities=26% Similarity=0.314 Sum_probs=117.5
Q ss_pred CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCC-CCCEECCCEEEEECCCCEEEEEECCCH----HHH----HHHHHH
Q ss_conf 12553038986236850446777886422210012-310001214999517843888851661----578----999866
Q gi|254780787|r 379 LDIRPPVVTIMGHVDHGKTSLLDAIRKADVAKGEI-GGITQHIGAYQVAYQGKNITFLDTPGH----AAF----YEMRAR 449 (884)
Q Consensus 379 ~~~R~pvv~v~ghvd~GKt~lld~~r~~~~~~~e~-ggitq~iga~~~~~~~~~~~~iDtPGh----~~f----~~~r~r 449 (884)
T Consensus 2 ~~~ksGfVaIiGrPNvGKSTLlN~l~G~KisIvS~k~QTTR~~I~GI~t~~~~QiIfvDTPGih~pk~~l~~~m~~~a~~ 81 (298)
T COG1159 2 MKFKSGFVAIIGRPNVGKSTLLNALVGQKISIVSPKPQTTRNRIRGIVTTDNAQIIFVDTPGIHKPKHALGELMNKAARS 81 (298)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHHHCCCEEEECCCCCHHHHHEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 97368999998699876899998985682575159853114421479986984499984898887651788999999998
Q ss_pred HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECC
Q ss_conf 64206805999983667402357778989970994156123312443320002210000132000123474036311002
Q gi|254780787|r 450 GARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKN 529 (884)
Q Consensus 450 g~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (884)
T Consensus 82 sl~dvDlilfvvd~~~~~~~~d~~il~~lk~~~~pvil~iNKID~~~~~~~--l~~~~~---~~~~~~~f~~ivpiSA~~ 156 (298)
T COG1159 82 ALKDVDLILFVVDADEGWGPGDEFILEQLKKTKTPVILVVNKIDKVKPKTV--LLKLIA---FLKKLLPFKEIVPISALK 156 (298)
T ss_pred HHCCCCEEEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCHHH--HHHHHH---HHHHHCCCCEEEEEECCC
T ss_conf 724575999998666568910799999776438986999984025784778--999999---998508830179951015
Q ss_pred CCCCCCCCCCHHCC
Q ss_conf 47741122100002
Q gi|254780787|r 530 NLNLDKLLDAILLQ 543 (884)
Q Consensus 530 ~~~~~~~~~~~~~~ 543 (884)
T Consensus 157 g~n~~~L~~~i~~~ 170 (298)
T COG1159 157 GDNVDTLLEIIKEY 170 (298)
T ss_pred CCCHHHHHHHHHHH
T ss_conf 67889999999985