HHsearch alignment for GI: 254780787 and conserved domain: COG3276

>COG3276 SelB Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis].
Probab=99.97  E-value=1.3e-31  Score=234.12  Aligned_cols=226  Identities=23%  Similarity=0.315  Sum_probs=177.5

Q ss_pred             EEEEEECCCCCHHHHHHHHHHHH--HHHCC-CCCCEECCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             38986236850446777886422--21001-2310001214999517843888851661578999866642068059999
Q gi|254780787|r  385 VVTIMGHVDHGKTSLLDAIRKAD--VAKGE-IGGITQHIGAYQVAYQGKNITFLDTPGHAAFYEMRARGARVTDIAVLVL  461 (884)
Q Consensus       385 vv~v~ghvd~GKt~lld~~r~~~--~~~~e-~ggitq~iga~~~~~~~~~~~~iDtPGh~~f~~~r~rg~~~~d~~ilvv  461 (884)
T Consensus         2 ii~t~GhidHgkT~L~~altg~~~d~l~EekKRG~TiDlg~~y~~~~d~~~~fIDvpgh~~~i~~miag~~~~d~alLvV   81 (447)
T COG3276           2 IIGTAGHIDHGKTTLLKALTGGVTDRLPEEKKRGITIDLGFYYRKLEDGVMGFIDVPGHPDFISNLLAGLGGIDYALLVV   81 (447)
T ss_pred             EEEEEEEEECCCHHHHHHHCCCCCCCCHHHHHCCCEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEE
T ss_conf             69974002014302233302553320545661584684205732577773688618984788999985405774589998


Q ss_pred             ECCCCCCHHHHHHHHHHHHCCCCE-EEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCH
Q ss_conf             836674023577789899709941-5612331244332000221000013200012347403631100247741122100
Q gi|254780787|r  462 AADEEIMPQAIESINHAKAADVSI-IVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDKLLDAI  540 (884)
Q Consensus       462 ~~~~g~~~qt~e~~~~~~~~~~p~-iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  540 (884)
T Consensus        82 ~~deGl~~qtgEhL~iLdllgi~~giivltk~D~~d~~--r~e~~i~~Il~~l~--l~~~~i~~~s~~~g~Gi~~Lk~~l  157 (447)
T COG3276          82 AADEGLMAQTGEHLLILDLLGIKNGIIVLTKADRVDEA--RIEQKIKQILADLS--LANAKIFKTSAKTGRGIEELKNEL  157 (447)
T ss_pred             ECCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCHH--HHHHHHHHHHHHCC--CCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf             47557664368899999861987328999622344678--89999999986502--000323011012578779999999


Q ss_pred             HCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHCCCCCCCCCC--CCCCEECCCCCCCCCCCCCCCCC
Q ss_conf             002333342000348666416777886377620000000000000000025665--55420001466532210000122
Q gi|254780787|r  541 LLQAEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKGNILVVGDQ--WGKIRALFNDRGQGISKAVPSMP  617 (884)
Q Consensus       541 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~  617 (884)
T Consensus       158 ~~L~~--~~e~d~~~~fri~IDraFtVKGvGTVVtGtv~sG~V~v~D~L~l~p~~k~v~VRsIq~-~d~d~~~a~AG~R  233 (447)
T COG3276         158 IDLLE--EIERDEQKPFRIAIDRAFTVKGVGTVVTGTVLSGEVKVGDKLYLSPINKEVRVRSIQA-HDVDVEEAKAGQR  233 (447)
T ss_pred             HHHHH--HHHHCCCCCEEEEEEEEEEECCCCEEEEEEEEEEEEEECCEEEEECCCCEEEEEEEEE-CCCCHHHCCCCCE
T ss_conf             87520--0554047865999755799513317998678643588788899905897689986320-6864555012251