HHsearch alignment for GI: 254780787 and conserved domain: COG3596
>COG3596 Predicted GTPase [General function prediction only].
Probab=97.10 E-value=0.0022 Score=41.06 Aligned_cols=112 Identities=21% Similarity=0.372 Sum_probs=77.7
Q ss_pred CCCEE-EEEECCCCCHHHHHHHHHHHHHHHCCCC----CCEECCCEEEEECCCCEEEEEECCCHHH-------HHHHHHH
Q ss_conf 53038-9862368504467778864222100123----1000121499951784388885166157-------8999866
Q gi|254780787|r 382 RPPVV-TIMGHVDHGKTSLLDAIRKADVAKGEIG----GITQHIGAYQVAYQGKNITFLDTPGHAA-------FYEMRAR 449 (884)
Q Consensus 382 R~pvv-~v~ghvd~GKt~lld~~r~~~~~~~e~g----gitq~iga~~~~~~~~~~~~iDtPGh~~-------f~~~r~r 449 (884)
T Consensus 37 ~~pvnvLi~G~TG~GKSSliNALF~~~~~~v~~vg~~t~~~~~~~~---~~~~~~l~lwDtPG~gdg~~~D~~~r~~~~d 113 (296)
T COG3596 37 KEPVNVLLMGATGAGKSSLINALFQGEVKEVSKVGVGTDITTRLRL---SYDGENLVLWDTPGLGDGKDKDAEHRQLYRD 113 (296)
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHH---HCCCCCEEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 6861589743777768899999970267342104668870156774---1266524884378855320221899999998
Q ss_pred HHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCC--CCEEEECCCCCCCC
Q ss_conf 642068059999836674023577789899709--94156123312443
Q gi|254780787|r 450 GARVTDIAVLVLAADEEIMPQAIESINHAKAAD--VSIIVAINKIDKLG 496 (884)
Q Consensus 450 g~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~--~p~iva~nk~d~~~ 496 (884)
T Consensus 114 ~l~~~DLvL~l~~~~draL~~d~~f~~dVi~~~~~~~~i~~VtQ~D~a~ 162 (296)
T COG3596 114 YLPKLDLVLWLIKADDRALGTDEDFLRDVIILGLDKRVLFVVTQADRAE 162 (296)
T ss_pred HHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEEEEEHHHHHC
T ss_conf 8632247999614777001477999999998605760699973665436