HHsearch alignment for GI: 254780787 and conserved domain: KOG0090

>KOG0090 consensus.
Probab=98.18  E-value=3.2e-06  Score=60.54  Aligned_cols=125  Identities=20%  Similarity=0.274  Sum_probs=78.1

Q ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEECCCCEEEEEECCCHHHHHHHHHH---HHHCCCCEE
Q ss_conf             53038986236850446777886422210012310001214999517843888851661578999866---642068059
Q gi|254780787|r  382 RPPVVTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAYQVAYQGKNITFLDTPGHAAFYEMRAR---GARVTDIAV  458 (884)
Q Consensus       382 R~pvv~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~~~~~~~~~~~~iDtPGh~~f~~~r~r---g~~~~d~~i  458 (884)
T Consensus        37 ~~~~Vll~Gl~dSGKT~LF~qL~~gs~~~-TvtSiepn~a~~r~gs~~--~~LVD~PGH~rlR~kl~e~~~~~~~akaiV  113 (238)
T KOG0090          37 KQNAVLLVGLSDSGKTSLFTQLITGSHRG-TVTSIEPNEATYRLGSEN--VTLVDLPGHSRLRRKLLEYLKHNYSAKAIV  113 (238)
T ss_pred             CCCCEEEEECCCCCCEEEEEEHHCCCCCC-EEEEECCCEEEEEECCCC--EEEEECCCCHHHHHHHHHHCCCCCCCEEEE
T ss_conf             68868999327898335542001387367-032104661357636862--388757995889999998734655221599


Q ss_pred             EEEECCCCCCH--------HHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCC
Q ss_conf             99983667402--------3577789899709941561233124433200022100001
Q gi|254780787|r  459 LVLAADEEIMP--------QAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKH  509 (884)
Q Consensus       459 lvv~~~~g~~~--------qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~  509 (884)
T Consensus       114 FVVDSa~f~k~vrdvaefLydil~~~~~~~~~~~vLIaCNKqDl~tAkt~~~Ir~~LEk  172 (238)
T KOG0090         114 FVVDSATFLKNVRDVAEFLYDILLDSRVKKNKPPVLIACNKQDLFTAKTAEKIRQQLEK  172 (238)
T ss_pred             EEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHCCCHHHHHHHHHH
T ss_conf             99833224600679999999999860123479988999555223213859999999999