HHsearch alignment for GI: 254780787 and conserved domain: KOG2486
>KOG2486 consensus.
Probab=98.62 E-value=4e-07 Score=66.66 Aligned_cols=156 Identities=24% Similarity=0.283 Sum_probs=108.6
Q ss_pred CCCCCEEEEEECCCCCHHHHHHHHH-HHHHHHCCC--CCCEECCCEEEEECCCCEEEEEECCC-------H---HHHHHH
Q ss_conf 2553038986236850446777886-422210012--31000121499951784388885166-------1---578999
Q gi|254780787|r 380 DIRPPVVTIMGHVDHGKTSLLDAIR-KADVAKGEI--GGITQHIGAYQVAYQGKNITFLDTPG-------H---AAFYEM 446 (884)
Q Consensus 380 ~~R~pvv~v~ghvd~GKt~lld~~r-~~~~~~~e~--ggitq~iga~~~~~~~~~~~~iDtPG-------h---~~f~~~ 446 (884)
T Consensus 133 k~~~pe~~~~g~SNVGKSSLln~~~r~k~~~~t~k~K~g~Tq~in~f~v---~~~~~~vDlPG~~~a~y~~~~~~d~~~~ 209 (320)
T KOG2486 133 KDKRPELAFYGRSNVGKSSLLNDLVRVKNIADTSKSKNGKTQAINHFHV---GKSWYEVDLPGYGRAGYGFELPADWDKF 209 (320)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC---CCEEEEEECCCCCCCCCCCCCCCHHHHH
T ss_conf 7888526662477622788876543214556403788765113200120---5548998468865456785574147675
Q ss_pred -----HHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCC-----CCCCCC
Q ss_conf -----8666420680599998366740235777898997099415612331244332000221000013-----200012
Q gi|254780787|r 447 -----RARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHD-----VFVESM 516 (884)
Q Consensus 447 -----r~rg~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~-----~~~~~~ 516 (884)
T Consensus 210 t~~Y~leR~nLv~--~FLLvd~sv~i~~~D~~~i~~~ge~~VP~t~vfTK~DK~k~~~~~~kKp~~~i~~~f~~l~~~~f 287 (320)
T KOG2486 210 TKSYLLERENLVR--VFLLVDASVPIQPTDNPEIAWLGENNVPMTSVFTKCDKQKKVKRTGKKPGLNIKINFQGLIRGVF 287 (320)
T ss_pred HHHHHHHHHHHHE--EEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHCCCCCCCCCCCCEEEHHHCCCCCE
T ss_conf 7888872653311--56663036788998769998875249973886302445553022355754001210200150004
Q ss_pred CCCCEEEEEEECCCCCCCCCCCCH
Q ss_conf 347403631100247741122100
Q gi|254780787|r 517 GGDILDVEISAKNNLNLDKLLDAI 540 (884)
Q Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~ 540 (884)
T Consensus 288 ~~~~Pw~~~Ssvt~~Grd~Ll~~i 311 (320)
T KOG2486 288 LVDLPWIYVSSVTSLGRDLLLLHI 311 (320)
T ss_pred ECCCCCEEEECCCCCCCEEEEEEH
T ss_conf 115870132043425720011016