HHsearch alignment for GI: 254780787 and conserved domain: PRK04000
>PRK04000 translation initiation factor IF-2 subunit gamma; Validated.
Probab=97.61 E-value=0.0002 Score=48.17 Aligned_cols=103 Identities=20% Similarity=0.305 Sum_probs=72.5
Q ss_pred HHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEECCCCCC--------EEEEEEEEEEEECCCEEEEEEC------CEEE
Q ss_conf 7899999999963069404788887899978873389870--------7899985217846980799669------9899
Q gi|254780787|r 767 YDLLDSIKDSMSELLSPEIRETFLGNAEVLEVFAVTKLGN--------VAGCKVSEGKVERGSGVRLIRN------STVI 832 (884)
Q Consensus 767 Y~L~d~~~~~~~~~l~~~~~~~~~g~a~v~~vF~~~k~~~--------i~G~~V~~G~i~~~~~~~v~r~------~~~i 832 (884)
T Consensus 189 ~~L~~~l~~~~---~~p~r~~~~~f~m~Vdr~F~i~g~Gt~~~~~~G~VvtGtv~~G~ik~GD~vei~Pg~~~~~~~~~~ 265 (410)
T PRK04000 189 DALIEAIEEEI---PTPERDLDKPPLMYVARSFDVNKPGTPPEKLKGGVIGGSLIQGVLKVGDEIEIRPGIKVEKGGKTK 265 (410)
T ss_pred CHHHHHHHHHC---CCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCEEEEECCCCCCCCCCCC
T ss_conf 08999898627---787778889944899888850579865535644178889976278429989994474334566531
Q ss_pred E---EEEEHHHHHCCHHHHHHHCCCEEEEEEE---CC--EEEEECCEE
Q ss_conf 8---2262576644600668727976699972---84--110058989
Q gi|254780787|r 833 Y---EGKLKTLKRFKDEVSEVHAGQDCGMAFE---KY--DNIQAGDMI 872 (884)
Q Consensus 833 ~---~g~i~sl~~~k~~v~ev~~g~ecgi~~~---~~--~~~~~gD~i 872 (884)
T Consensus 266 ~~pi~t~V~si~~~~~~~~~a~aG~~vai~~~ld~~i~r~D~~rG~Vl 313 (410)
T PRK04000 266 WEPITTKITSLRAGGEKVEEARPGGLVGVGTKLDPALTKADALAGSVA 313 (410)
T ss_pred CCCCEEEEEEEEECCEEHHEECCCCEEEECCCCCCCCCHHHHHCCCEE
T ss_conf 122126998997478391101367658522334555335574156554