HHsearch alignment for GI: 254780787 and conserved domain: PRK09518
>PRK09518 bifunctional cytidylate kinase/GTP-binding protein; Reviewed.
Probab=99.59 E-value=2.1e-14 Score=116.53 Aligned_cols=157 Identities=23% Similarity=0.264 Sum_probs=123.1
Q ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHH--HHHCCCCCCEECCCEEEEECCCCEEEEEECCC----------HHHHHHHHH
Q ss_conf 553038986236850446777886422--21001231000121499951784388885166----------157899986
Q gi|254780787|r 381 IRPPVVTIMGHVDHGKTSLLDAIRKAD--VAKGEIGGITQHIGAYQVAYQGKNITFLDTPG----------HAAFYEMRA 448 (884)
Q Consensus 381 ~R~pvv~v~ghvd~GKt~lld~~r~~~--~~~~e~ggitq~iga~~~~~~~~~~~~iDtPG----------h~~f~~~r~ 448 (884)
T Consensus 450 ~~~~rIAIIGRPNVGKSTLiN~LlgeeR~IVs~ia-GTTRDsId~~~~~~g~~~~lIDTAGiRkk~k~~~~iE~~S~~rt 528 (714)
T PRK09518 450 SGLRRVALVGRPNVGKSSLLNQLTREERAVVNDLA-GTTRDPVDEIVNIDGKDWLFVDTAGIRRKQKKLTGAEYYASLRT 528 (714)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHCCCEEEECCCC-CCEECEEEEEEEECCEEEEEEECHHCCCCCCCCCCCCHHHHHHH
T ss_conf 67735888669988789999999689758856889-85023055679999978999986001524432543227999999
Q ss_pred HH-HHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEE
Q ss_conf 66-42068059999836674023577789899709941561233124433200022100001320001234740363110
Q gi|254780787|r 449 RG-ARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISA 527 (884)
Q Consensus 449 rg-~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 527 (884)
T Consensus 529 ~~aI~~adVvllviDA~~git~QD~~Ia~~i~~~gk~~IivvNKWDLv~~~~~---~~~~~~i~~~l~~~~~apiv~iSA 605 (714)
T PRK09518 529 QAAIERCELALILFDASQPISEQDLRVMSMAVDAGRALVLAFNKWDLMDEFRR---QRLEREIDTEFDRVMWAERVNISA 605 (714)
T ss_pred HHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEECHHCCCHHHH---HHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 99886588999998677675289999999999859937999961430686689---999999997563689998899966
Q ss_pred CCCCCCCCCCCCHH
Q ss_conf 02477411221000
Q gi|254780787|r 528 KNNLNLDKLLDAIL 541 (884)
Q Consensus 528 ~~~~~~~~~~~~~~ 541 (884)
T Consensus 606 ~~g~~v~kl~~~i~ 619 (714)
T PRK09518 606 KTGRHTNRLARAMD 619 (714)
T ss_pred CCCCCHHHHHHHHH
T ss_conf 78978899999999