HHsearch alignment for GI: 254780787 and conserved domain: PRK11537

>PRK11537 putative GTP-binding protein YjiA; Provisional.
Probab=95.89  E-value=0.055  Score=31.52  Aligned_cols=114  Identities=18%  Similarity=0.196  Sum_probs=68.5

Q ss_pred             CCCEEEEEECCCCCHHHHHHHHHHH------HHHHCCCCCCEEC---CC-----EEEEECC-------------------
Q ss_conf             5303898623685044677788642------2210012310001---21-----4999517-------------------
Q gi|254780787|r  382 RPPVVTIMGHVDHGKTSLLDAIRKA------DVAKGEIGGITQH---IG-----AYQVAYQ-------------------  428 (884)
Q Consensus       382 R~pvv~v~ghvd~GKt~lld~~r~~------~~~~~e~ggitq~---ig-----a~~~~~~-------------------  428 (884)
T Consensus         3 ~IPVtiltGFLGaGKTTlL~~lL~~~~~~riaVivNEfGev~iD~~li~~~~~~v~eL~nGCiCCs~~~dl~~~l~~l~~   82 (317)
T PRK11537          3 PIAVTLLTGFLGAGKTTLLRHILNEQHGYKIAVIENEFGEVSVDDQLIGDRATQIKTLTNGCICCSRSNELEDALLDLLD   82 (317)
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCEEEECCCCEEEEECCHHHHHHHHHHH
T ss_conf             76889983088889999999997277899789998376145332988735653268844773687305228999999998


Q ss_pred             -----C--CEEEEEECCCHHHHHHHHHH--------HHHCCCCEEEEEECCCCCCHHHHHHHHH-HHHCCCCEEEECCCC
Q ss_conf             -----8--43888851661578999866--------6420680599998366740235777898-997099415612331
Q gi|254780787|r  429 -----G--KNITFLDTPGHAAFYEMRAR--------GARVTDIAVLVLAADEEIMPQAIESINH-AKAADVSIIVAINKI  492 (884)
Q Consensus       429 -----~--~~~~~iDtPGh~~f~~~r~r--------g~~~~d~~ilvv~~~~g~~~qt~e~~~~-~~~~~~p~iva~nk~  492 (884)
T Consensus        83 ~~~~~~~~~D~IiIEtsGlAdP~~I~~~~~~~~~l~~~~~Ld~vVtvVDa~~~~~~--l~~~~~~~~Qi~~AD~illnK~  160 (317)
T PRK11537         83 NLDRGNIQFDRLVIECTGMADPGPIIQTFFSHEVLCQRYLLDGVIALVDAVHADEQ--MNQFTIAQSQVGYADRILLTKT  160 (317)
T ss_pred             HHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCEEEEEEHHHHHHH--HHCCHHHHHHHHHCCEEEEECC
T ss_conf             66435777547999625778839999998612565653203655999866555766--5303466766631868997420


Q ss_pred             CCCCC
Q ss_conf             24433
Q gi|254780787|r  493 DKLGA  497 (884)
Q Consensus       493 d~~~~  497 (884)
T Consensus       161 Dlv~~  165 (317)
T PRK11537        161 DVAGE  165 (317)
T ss_pred             CCCCH
T ss_conf             02365