HHsearch alignment for GI: 254780787 and conserved domain: PRK12312
>PRK12312 infB translation initiation factor IF-2; Provisional.
Probab=100.00 E-value=0 Score=1303.13 Aligned_cols=582 Identities=43% Similarity=0.703 Sum_probs=548.0
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHH--HHHHH
Q ss_conf 1111111121111100001222222100134555302400023445535667766654101111222101233--32210
Q gi|254780787|r 295 REKISREIVVPETITIQELSQRMSERSADVIKFLMKEGQIMKPGDVIDADLSEIIANEFGNTVKRVLESDIEV--GIFDV 372 (884)
Q Consensus 295 ~ek~~rev~ipE~itv~ELA~~m~~~~~evik~l~~~G~~~t~nq~lD~etaelva~E~g~ev~~~~~~~~~~--~~~~~ 372 (884)
T Consensus 27 ~~~~~~~~~i~~~~tv~~la~~~~~~~~~vi~~l~~~G~~~~~n~~ld~~~~~~i~~e~g~~~~~~~~~~~~~~~~~~~~ 106 (610)
T PRK12312 27 TGVKDGVFVFTGPLSIFEFAQKINKSVAEIIKHFFLKGLMYNLNTILSEEQIAELCLEFGFDFKKETQITAENFLDNISF 106 (610)
T ss_pred CCCCCCEEEECCCEEHHHHHHHHCCCHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHCC
T ss_conf 03678749918966999999887889999999999779487578734999999999983983798145416666664024
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHH
Q ss_conf 12410012553038986236850446777886422210012310001214999517843888851661578999866642
Q gi|254780787|r 373 ADSESDLDIRPPVVTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAYQVAYQGKNITFLDTPGHAAFYEMRARGAR 452 (884)
Q Consensus 373 ~~~~~~~~~R~pvv~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~~~~~~~~~~~~iDtPGh~~f~~~r~rg~~ 452 (884)
T Consensus 107 ~~~~~~l~~R~PvVtimGHVDHGKTsLLD~iR~t~V~~~EaGGITQhIGA~~v~~~~~~itFiDTPGHeAFt~mR~RGa~ 186 (610)
T PRK12312 107 EDDKKDLEKRPPIVTIMGHVDHGKTTLLDTIRKTNVVASEAGGITQHIGAYQVEYQGKKITFIDTPGHEAFTEMRARGAK 186 (610)
T ss_pred CCCHHHCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCEECEEEEEECCCEEEEECCCCHHHHHHHHHCCCC
T ss_conf 57653367889989996772577225889985486413467766440044999867976899728967989999970776
Q ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 06805999983667402357778989970994156123312443320002210000132000123474036311002477
Q gi|254780787|r 453 VTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLN 532 (884)
Q Consensus 453 ~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (884)
T Consensus 187 vtDI~iLVVaaddGv~pQTiEaI~~ak~a~vpiiVAiNKiDkp~a~~~~v~~~L~~~g~~~E~~GGdv~~V~iSAktg~G 266 (610)
T PRK12312 187 VTDIVILVVAADDGVKPQTEEAIDHAKAANVPIIVFVNKMDKPNANPDRIKNELSKYDLVPEEWGGDTPFVYGSALKNEG 266 (610)
T ss_pred CCCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEEECCCCCC
T ss_conf 54579999975789774269999999975998899850446788987899999987076678857944599903687989
Q ss_pred CCCCCCCHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCHHHCCCCCCCCCCCCCCEECCCCCCCCCCCC
Q ss_conf 41122100002333342000348666416777886377620000000000000000025665554200014665322100
Q gi|254780787|r 533 LDKLLDAILLQAEMLDLKTSINRKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKGNILVVGDQWGKIRALFNDRGQGISKA 612 (884)
Q Consensus 533 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 612 (884)
T Consensus 267 Id~LLe~IlL~AE~leLka~~~~~a~G~VIEsk~dkg~G~vatviVq~GtLk~GD~iV~G~~~GkVRam~d~~g~~lk~A 346 (610)
T PRK12312 267 IDELLDSILLLAEILNLKANPNRLAIGTVIEAKLDKGKGPVATLIVQNGTLKVGDFIVAGSTYGKIRSMEDENGKKLKKA 346 (610)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCEEEEEEECCEEECCCEEEECCCCCCCCEEECCCCCCCCCC
T ss_conf 99999999999998765227898606999997861687636899983587815998998986686215773678614341
Q ss_pred CCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC
Q ss_conf 00122211112347555540431242036689999999999999987766445657888852000123023344433310
Q gi|254780787|r 613 VPSMPIEVLGLQGMPMAGDKFGVVDSESRAREIAQYRQRVTRNKSMARRLGSHSALEKLVKNANISSKMKEFPVIIKGDV 692 (884)
Q Consensus 613 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ik~d~ 692 (884)
T Consensus 347 ~PS~pV~I~Gl~~vP~aGd~~~vv~~Ek~Ak~ia~~r~~~~~~~~~~~~-----~-~e~~~~~~~~~~~k~l~vIIKADv 420 (610)
T PRK12312 347 LPSTPVKVSGLNEVPQAGDKFIVFNDEKFAKKIANEKKQKQKQNELKSL-----Q-LEDIKQNIDSGELKELNIIIKADV 420 (610)
T ss_pred CCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH-----H-HHHHHHHHHCCCCCEEEEEEEECC
T ss_conf 7998579846756756797699728899999999999999999887440-----0-888998863367512337998466
Q ss_pred CCCHHHHHHHHHCCCCCEEEEEEEECCCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEHHHHHHHH
Q ss_conf 23123455542115765356578851268575778876432598799963899989999999839859975026789999
Q gi|254780787|r 693 QGSVEAIVDSLGALKNSEVCLSIVHSSVGAINETDVSLAKASGAVIFGFNVRASSQARVLAIKDEIKILYYKIIYDLLDS 772 (884)
Q Consensus 693 ~gs~eal~~~l~~~~~~ev~i~v~~~~VG~v~~~DV~~A~~~~a~Il~FnVkv~~~a~~~A~~~gV~I~~~~IIY~L~d~ 772 (884)
T Consensus 421 ~GSlEAI~~sL~kl~~~eV~i~Ii~agVG~ItesDV~LA~as~AiIigFNV~~~~~a~~~A~~~gV~Ir~y~IIY~LiDd 500 (610)
T PRK12312 421 QGSLEAIKGIISKINVSGVKINIIRAAVGTISESDILLAQTSNSIIIGFNVKPSAIIKKLAESQGIKIRSHNIIYKIIEE 500 (610)
T ss_pred CCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCCEEEECHHHHHHHH
T ss_conf 76499999998656886435778633457776889999986699189973768877999877448626984228889999
Q ss_pred HHHHHHHHCCCEEEEEEEEEEEEEEEEECCCCCCEEEEEEEEEEEECCCEEEEEECCEEEEEEEEHHHHHCCHHHHHHHC
Q ss_conf 99999630694047888878999788733898707899985217846980799669989982262576644600668727
Q gi|254780787|r 773 IKDSMSELLSPEIRETFLGNAEVLEVFAVTKLGNVAGCKVSEGKVERGSGVRLIRNSTVIYEGKLKTLKRFKDEVSEVHA 852 (884)
Q Consensus 773 ~~~~~~~~l~~~~~~~~~g~a~v~~vF~~~k~~~i~G~~V~~G~i~~~~~~~v~r~~~~i~~g~i~sl~~~k~~v~ev~~ 852 (884)
T Consensus 501 vk~~m~g~L~p~~~E~~iG~AeV~~vF~~sk~g~IAGc~V~~G~i~r~~~vRVlR~~~vI~eG~I~SLrr~KddVkEV~~ 580 (610)
T PRK12312 501 IEKILKGMLDPVYEEVVIGQAEVRKLFKHSKVGTIAGCYVTSGKVKRNAKVRVIRNGKVIHEGKIASLKHLKDDVKEVEK 580 (610)
T ss_pred HHHHHHCCCCCCEEEEEEEEEEEEEEEECCCCEEEEEEEEEECEEEECCEEEEEECCEEEEEEEEHHHHHCCCCCCHHCC
T ss_conf 99998458997247999899998888864886178999997468971984899889999997167774020102112058
Q ss_pred CCEEEEEEECCEEEEECCEEEEEEEEEEEE
Q ss_conf 976699972841100589899988999851
Q gi|254780787|r 853 GQDCGMAFEKYDNIQAGDMIECFSIEHIKR 882 (884)
Q Consensus 853 g~ecgi~~~~~~~~~~gD~i~~~~~~~~~~ 882 (884)
T Consensus 581 G~ECGI~l~~f~di~~GDiIE~ye~~ev~~ 610 (610)
T PRK12312 581 GKECGIHIKNFNDIKENDIIEAYEDVEVEE 610 (610)
T ss_pred CCCCEEEECCCCCCCCCCEEEEEEEEEEEC
T ss_conf 953248832735687698999999999639