HHsearch alignment for GI: 254780787 and conserved domain: TIGR00437
>TIGR00437 feoB ferrous iron transport protein B; InterPro: IPR003373 Escherichia coli has an iron(II) transport system (feo) which may make an important contribution to the iron supply of the cell under anaerobic conditions. FeoB has been identified as part of this transport system and may play a role in the transport of ferrous iron. FeoB is a large 700-800 amino acid integral membrane protein. The N terminus contains a P-loop motif suggesting that iron transport may be ATP dependent .; GO: 0005525 GTP binding, 0015093 ferrous iron transmembrane transporter activity, 0015684 ferrous iron transport, 0009276 1-2nm peptidoglycan-based cell wall, 0016021 integral to membrane.
Probab=98.57 E-value=4.2e-08 Score=73.41 Aligned_cols=143 Identities=22% Similarity=0.348 Sum_probs=109.6
Q ss_pred ECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEECCCCEEEEEECCCHHHHHHHHH---HH------HHCCCCEEEE
Q ss_conf 23685044677788642221001231000121499951784388885166157899986---66------4206805999
Q gi|254780787|r 390 GHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAYQVAYQGKNITFLDTPGHAAFYEMRA---RG------ARVTDIAVLV 460 (884)
Q Consensus 390 ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~~~~~~~~~~~~iDtPGh~~f~~~r~---rg------~~~~d~~ilv 460 (884)
T Consensus 1 GNPNVGKStlFN~LTG~~~~vGNwPG~TVek~eg~l~~~g~~i~ivDLPG~YSL~~~S~~dE~v~~dyl~~e~~DLv~nV 80 (733)
T TIGR00437 1 GNPNVGKSTLFNALTGANQKVGNWPGVTVEKKEGKLKFQGEDIEIVDLPGIYSLTTFSGLDEKVARDYLLNEKPDLVVNV 80 (733)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEECCCCEEEEEEEEEEECCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEE
T ss_conf 99981589999874158707873588707877889752462789984487300589987427999899753899679997
Q ss_pred EECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCH
Q ss_conf 98366740235777898997099415612331244332000221000013200012347403631100247741122100
Q gi|254780787|r 461 LAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDKLLDAI 540 (884)
Q Consensus 461 v~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (884)
T Consensus 81 VDA~-nLERnL~LTLQ-L~E~G~p~i~~LN~~DeA~k~GI~Id~~~Lee-----~L--GvPVv~~~A~~g~G~~~L~~~i 151 (733)
T TIGR00437 81 VDAS-NLERNLYLTLQ-LLELGIPMILALNLVDEAEKKGIRIDEEKLEE-----RL--GVPVVPTSATEGRGIEELKDAI 151 (733)
T ss_pred ECHH-HHHHHHHHHHH-HHHHCCHHHHHHHHHHHHHHCCCEECHHHHHH-----HC--CCCEEEEEEEECCCHHHHHHHH
T ss_conf 2566-77789999999-99716258568726789977296312577754-----33--8652565321057789999999
Q ss_pred H
Q ss_conf 0
Q gi|254780787|r 541 L 541 (884)
Q Consensus 541 ~ 541 (884)
T Consensus 152 ~ 152 (733)
T TIGR00437 152 R 152 (733)
T ss_pred H
T ss_conf 9