HHsearch alignment for GI: 254780787 and conserved domain: TIGR01393

>TIGR01393 lepA GTP-binding protein LepA; InterPro: IPR006297 LepA (GUF1 in Saccaromyces) is a GTP-binding membrane protein related to EF-G and EF-Tu. Two types of phylogenetic tree, rooted by other GTP-binding proteins, suggest that eukaryotic homologs (including GUF1 of yeast) originated within the bacterial LepA family. The function of the proteins in this family are unknown. ; GO: 0005525 GTP binding.
Probab=100.00  E-value=7.3e-42  Score=304.32  Aligned_cols=200  Identities=28%  Similarity=0.417  Sum_probs=176.6

Q ss_pred             EEEEEECCCCCHHHHHHHHHH-HHHHHCC--------------CCCCEECCCEEEEECC------CCEEEEEECCCHHHH
Q ss_conf             389862368504467778864-2221001--------------2310001214999517------843888851661578
Q gi|254780787|r  385 VVTIMGHVDHGKTSLLDAIRK-ADVAKGE--------------IGGITQHIGAYQVAYQ------GKNITFLDTPGHAAF  443 (884)
Q Consensus       385 vv~v~ghvd~GKt~lld~~r~-~~~~~~e--------------~ggitq~iga~~~~~~------~~~~~~iDtPGh~~f  443 (884)
T Consensus         5 NFsIIAHIDHGKSTLADRlle~T~~~s~R~m~~Q~LD~MDlERERGITIK~qaV~l~Yk~~~DGe~Y~LNLIDTPGHVDF   84 (598)
T TIGR01393         5 NFSIIAHIDHGKSTLADRLLEKTGAVSEREMREQVLDSMDLERERGITIKAQAVRLKYKVAKDGETYVLNLIDTPGHVDF   84 (598)
T ss_pred             CEEEEEEECCCCCHHHHHHHHHCCCCCCHHHHHCCCCCCCEEECCCCEEECCCEEEEEEEECCCCEEEEEEECCCCCCCC
T ss_conf             26788462489324889999861745620254305775100000582011563475337533887889964528897212


Q ss_pred             HHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEE
Q ss_conf             99986664206805999983667402357778989970994156123312443320002210000132000123474036
Q gi|254780787|r  444 YEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDV  523 (884)
Q Consensus       444 ~~~r~rg~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  523 (884)
T Consensus        85 sYEVSRSLAACEGALL~VDA~QGvEAQT~aN~YlAlE~dLeIIPViNKIDLP~Adpe~v~~eIe~~iGld~~-----~ai  159 (598)
T TIGR01393        85 SYEVSRSLAACEGALLLVDAAQGVEAQTLANVYLALENDLEIIPVINKIDLPSADPERVKKEIEEVIGLDAS-----EAI  159 (598)
T ss_pred             CHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC-----CCE
T ss_conf             737888888716403561410323588899998875618758477825368888858999987654188964-----303


Q ss_pred             EEEECCCCCCCCCCCCHHCCCCCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHCCHHHCCCCCCC
Q ss_conf             3110024774112210000233334200034-8666416777886377620000000000000000025
Q gi|254780787|r  524 EISAKNNLNLDKLLDAILLQAEMLDLKTSIN-RKAEGIVVEGKLDRGRGPVVTVLVQKGTLSKGNILVV  591 (884)
Q Consensus       524 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  591 (884)
T Consensus       160 ~~SAKtG~Gi~e~LEaIv--~~vPpP~Gd~~DapLkALIFDS~YD~YrGVv~~vRv~~G~ik~gD~I~~  226 (598)
T TIGR01393       160 LASAKTGIGIEEILEAIV--KRVPPPKGDPDDAPLKALIFDSHYDNYRGVVVLVRVFEGTIKKGDKIRF  226 (598)
T ss_pred             EEEECCCCCHHHHHHHHH--HCCCCCCCCCCCCCCEEEEEEEEECCCCEEEEEEEEEECEECCCCEEEE
T ss_conf             875036788899988971--0181001138886632278843543865089999995268646988999