HHsearch alignment for GI: 254780787 and conserved domain: cd01850
>cd01850 CDC_Septin CDC/Septin. Septins are a conserved family of GTP-binding proteins associated with diverse processes in dividing and non-dividing cells. They were first discovered in the budding yeast S. cerevisiae as a set of genes (CDC3, CDC10, CDC11 and CDC12) required for normal bud morphology. Septins are also present in metazoan cells, where they are required for cytokinesis in some systems, and implicated in a variety of other processes involving organization of the cell cortex and exocytosis. In humans, 12 septin genes generate dozens of polypeptides, many of which comprise heterooligomeric complexes. Since septin mutants are commonly defective in cytokinesis and formation of the neck formation of the neck filaments/septin rings, septins have been considered to be the primary constituents of the neck filaments. Septins belong to the GTPase superfamily for their conserved GTPase motifs and enzymatic activities.
Probab=96.69 E-value=0.0087 Score=37.02 Aligned_cols=111 Identities=21% Similarity=0.354 Sum_probs=72.8
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCCC--------CCCEECCCEEEEEC--C--CCEEEEEECCCHHHHHHHH------
Q ss_conf 8986236850446777886422210012--------31000121499951--7--8438888516615789998------
Q gi|254780787|r 386 VTIMGHVDHGKTSLLDAIRKADVAKGEI--------GGITQHIGAYQVAY--Q--GKNITFLDTPGHAAFYEMR------ 447 (884)
Q Consensus 386 v~v~ghvd~GKt~lld~~r~~~~~~~e~--------ggitq~iga~~~~~--~--~~~~~~iDtPGh~~f~~~r------ 447 (884)
T Consensus 7 imVvG~sGlGKsTfiNtLf~~~~~~~~~~~~~~~~~~~~t~~i~~~~~~i~e~g~~l~LtviDTpGfGd~i~n~~~~~~I 86 (276)
T cd01850 7 IMVVGESGLGKSTFINTLFNTKLIPSDYPPDPAEEHIDKTVEIKSSKAEIEENGVKLKLTVIDTPGFGDNINNSDCWKPI 86 (276)
T ss_pred EEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCCCCCCHHHHHHHH
T ss_conf 99976899988999999747857787777881320568882589999999639989999999768841223603409999
Q ss_pred ------------------HHHHHCCC----CEEEEEEC-CCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCC
Q ss_conf ------------------66642068----05999983-6674023577789899709941561233124433
Q gi|254780787|r 448 ------------------ARGARVTD----IAVLVLAA-DEEIMPQAIESINHAKAADVSIIVAINKIDKLGA 497 (884)
Q Consensus 448 ------------------~rg~~~~d----~~ilvv~~-~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~ 497 (884)
T Consensus 87 ~~yI~~qf~~yl~eE~~i~R~~~~~D~RVH~cLYFI~Ptgh~L~~lDi~~mk~Ls-~~vNvIPVIaKADtlT~ 158 (276)
T cd01850 87 VDYIDDQFDQYLREESRIKRNPRIPDTRVHACLYFIEPTGHGLKPLDIEFMKRLS-KRVNIIPVIAKADTLTP 158 (276)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHC-CCCCEEEEEECCCCCCH
T ss_conf 9999999999999985314578887774489999967888888799999999962-75645667851666999