HHsearch alignment for GI: 254780787 and conserved domain: cd01890
>cd01890 LepA LepA subfamily. LepA belongs to the GTPase family of and exhibits significant homology to the translation factors EF-G and EF-Tu, indicating its possible involvement in translation and association with the ribosome. LepA is ubiquitous in bacteria and eukaryota (e.g. yeast GUF1p), but is missing from archaea. This pattern of phyletic distribution suggests that LepA evolved through a duplication of the EF-G gene in bacteria, followed by early transfer into the eukaryotic lineage, most likely from the promitochondrial endosymbiont. Yeast GUF1p is not essential and mutant cells did not reveal any marked phenotype.
Probab=100.00 E-value=1.4e-36 Score=268.09 Aligned_cols=152 Identities=28% Similarity=0.422 Sum_probs=127.7
Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHHCC---------------CCCCEECCCEEEEECCC-----CEEEEEECCCHHHHHH
Q ss_conf 898623685044677788642221001---------------23100012149995178-----4388885166157899
Q gi|254780787|r 386 VTIMGHVDHGKTSLLDAIRKADVAKGE---------------IGGITQHIGAYQVAYQG-----KNITFLDTPGHAAFYE 445 (884)
Q Consensus 386 v~v~ghvd~GKt~lld~~r~~~~~~~e---------------~ggitq~iga~~~~~~~-----~~~~~iDtPGh~~f~~ 445 (884)
T Consensus 3 iaiiGHvd~GKTTL~~~ll~~tg~i~~~~~~~~~~D~~~~E~eRgiTi~~~~~~~~~~~~~~~~~~in~iDtPGh~dF~~ 82 (179)
T cd01890 3 FSIIAHIDHGKSTLADRLLELTGTVSKREMKEQVLDSMDLERERGITIKAQTVRLNYKAKDGQEYLLNLIDTPGHVDFSY 82 (179)
T ss_pred EEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCEECCCCHHHHHCCCEEEEEEEEEEEECCCCCCEEEEEEECCCCCCCHH
T ss_conf 99994899898999999999859954145732441651767863866874336888413678714899998998645177
Q ss_pred HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEE
Q ss_conf 98666420680599998366740235777898997099415612331244332000221000013200012347403631
Q gi|254780787|r 446 MRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEI 525 (884)
Q Consensus 446 ~r~rg~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 525 (884)
T Consensus 83 ~~~~al~~~D~allVVda~~Gv~~qT~~~~~~a~~~~~p~ivviNKiD~~~ad~~~v~~~i~~~~g~-----~~~~~v~v 157 (179)
T cd01890 83 EVSRSLAACEGALLLVDATQGVEAQTLANFYLALENNLEIIPVINKIDLPSADPERVKQQIEDVLGL-----DPSEAILV 157 (179)
T ss_pred HHHHHHHHHCEEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCC-----CCCCEEEE
T ss_conf 8988997544278998647787374899999998769988999865556778999999999998688-----97674884
Q ss_pred EECCCCCCCCCCCCHHC
Q ss_conf 10024774112210000
Q gi|254780787|r 526 SAKNNLNLDKLLDAILL 542 (884)
Q Consensus 526 ~~~~~~~~~~~~~~~~~ 542 (884)
T Consensus 158 SA~~g~gv~~Ll~~i~~ 174 (179)
T cd01890 158 SAKTGLGVEDLLEAIVE 174 (179)
T ss_pred ECCCCCCHHHHHHHHHH
T ss_conf 37889798999999996