>cd01897 NOG NOG1 is a nucleolar GTP-binding protein present in eukaryotes ranging from trypanosomes to humans. NOG1 is functionally linked to ribosome biogenesis and found in association with the nuclear pore complexes and identified in many preribosomal complexes. Thus, defects in NOG1 can lead to defects in 60S biogenesis. The S. cerevisiae NOG1 gene is essential for cell viability, and mutations in the predicted G motifs abrogate function. It is a member of the ODN family of GTP-binding proteins that also includes the bacterial Obg and DRG proteins.

Probab=99.63 E-value=7.2e-15 Score=119.69 Aligned_cols=150 Identities=19% Similarity=0.231 Sum_probs=103.4 Q ss_pred CEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEEEECCCCEEEEEECCCH--HHHH---HHHHHH----HHCC Q ss_conf 038986236850446777886422210012310001214999517843888851661--5789---998666----4206 Q gi|254780787|r 384 PVVTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAYQVAYQGKNITFLDTPGH--AAFY---EMRARG----ARVT 454 (884) Q Consensus 384 pvv~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~~~~~~~~~~~~iDtPGh--~~f~---~~r~rg----~~~~ 454 (884) T Consensus 1 P~VaivG~pNvGKStL~N~L~g~~~~v~~~p~TTr~~~~~~~~~~~~~~~liDTpGi~~~~~~~~~~ie~~~~~~l~~~~ 80 (168) T cd01897 1 PTLVIAGYPNVGKSSLVNKLTRAKPEVAPYPFTTKSLFVGHFDYKYLRWQVIDTPGLLDRPLEERNTIEMQAITALAHLR 80 (168) T ss_pred CEEEEECCCCCCHHHHHHHHHCCCCEECCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCC T ss_conf 97999889998899999999589860237587235743689998372768724886556747888899999999998357 Q ss_pred CCEEEEEECCCCCCHH---HHHHHHHHHH--CCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECC Q ss_conf 8059999836674023---5777898997--0994156123312443320002210000132000123474036311002 Q gi|254780787|r 455 DIAVLVLAADEEIMPQ---AIESINHAKA--ADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKN 529 (884) Q Consensus 455 d~~ilvv~~~~g~~~q---t~e~~~~~~~--~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (884) T Consensus 81 d~il~viD~~~~~~~~~~~~~~l~~~i~~~~~~~p~i~v~NK~Dl~~~~~~~~~~~~-------~~~~-~~~vi~ISA~~ 152 (168) T cd01897 81 AAVLFLFDPSETCGYSLEEQLSLFEEIKPLFKNKPVIVVLNKIDLLTFEDLSEIEEE-------EELE-GEEVLKISTLT 152 (168) T ss_pred CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHH-------HHCC-CCCEEEEECCC T ss_conf 768999968876784899999999987765258887999947534581007999999-------9708-99889998158 Q ss_pred CCCCCCCCCCHH Q ss_conf 477411221000 Q gi|254780787|r 530 NLNLDKLLDAIL 541 (884) Q Consensus 530 ~~~~~~~~~~~~ 541 (884) T Consensus 153 g~Gi~~L~~~i~ 164 (168) T cd01897 153 EEGVDEVKNKAC 164 (168) T ss_pred CCCHHHHHHHHH T ss_conf 969999999999

HHsearch alignment for GI: 254780787 and conserved domain: cd01897