HHsearch alignment for GI: 254780787 and conserved domain: cd04122

>cd04122 Rab14 Rab14 subfamily. Rab14 GTPases are localized to biosynthetic compartments, including the rough ER, the Golgi complex, and the trans-Golgi network, and to endosomal compartments, including early endosomal vacuoles and associated vesicles. Rab14 is believed to function in both the biosynthetic and recycling pathways between the Golgi and endosomal compartments. Rab14 has also been identified on GLUT4 vesicles, and has been suggested to help regulate GLUT4 translocation. In addition, Rab14 is believed to play a role in the regulation of phagocytosis. GTPase activating proteins (GAPs) interact with GTP-bound Rab and accelerate the hydrolysis of GTP to GDP. Guanine nucleotide exchange factors (GEFs) interact with GDP-bound Rabs to promote the formation of the GTP-bound state. Rabs are further regulated by guanine nucleotide dissociation inhibitors (GDIs), which facilitate Rab recycling by masking C-terminal lipid binding and promoting cytosolic localization. Most Rab GT
Probab=99.06  E-value=4e-10  Score=87.21  Aligned_cols=143  Identities=20%  Similarity=0.247  Sum_probs=96.1

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEE----EEECC--CCEEEEEECCCHHHHHHHHHHHHHCCCCEEE
Q ss_conf             89862368504467778864222100123100012149----99517--8438888516615789998666420680599
Q gi|254780787|r  386 VTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAY----QVAYQ--GKNITFLDTPGHAAFYEMRARGARVTDIAVL  459 (884)
Q Consensus       386 v~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~----~~~~~--~~~~~~iDtPGh~~f~~~r~rg~~~~d~~il  459 (884)
T Consensus         5 ivlvGd~~VGKTsli~r~~~~~f~~~----~~~Tig~~~~~k~i~~~~~~~~l~iwDtaG~e~~~~~~~~~~~~a~~~il   80 (166)
T cd04122           5 YIIIGDMGVGKSCLLHQFTEKKFMAD----CPHTIGVEFGTRIIEVNGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALM   80 (166)
T ss_pred             EEEECCCCCCHHHHHHHHHCCCCCCC----CCCCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCCCCHHHEECCCEEEE
T ss_conf             99999999579999999912988999----99974468899999999999999999899985444252111431546599


Q ss_pred             EEECCCCCCHHHHHHHH----HHHH---CCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf             99836674023577789----8997---0994156123312443320002210000132000123474036311002477
Q gi|254780787|r  460 VLAADEEIMPQAIESIN----HAKA---ADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLN  532 (884)
Q Consensus       460 vv~~~~g~~~qt~e~~~----~~~~---~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  532 (884)
T Consensus        81 vydvt~---~~Sf~~l~~w~~~~~~~~~~~~~iilVGNK~DL~~~r~--V~~~e~~--~~a~~~--~~~~~E~SAk~g~n  151 (166)
T cd04122          81 VYDITR---RSTYNHLSSWLTDARNLTNPNTVIFLIGNKADLEAQRD--VTYEEAK--QFADEN--GLLFLECSAKTGEN  151 (166)
T ss_pred             EECCCC---HHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHCCC--CCHHHHH--HHHHHC--CCEEEEECCCCCCC
T ss_conf             725874---76799999999999985699975870340157444389--9999999--999986--99899986587808


Q ss_pred             CCCCCCCHH
Q ss_conf             411221000
Q gi|254780787|r  533 LDKLLDAIL  541 (884)
Q Consensus       533 ~~~~~~~~~  541 (884)
T Consensus       152 V~e~F~~l~  160 (166)
T cd04122         152 VEDAFLETA  160 (166)
T ss_pred             HHHHHHHHH
T ss_conf             899999999