HHsearch alignment for GI: 254780787 and conserved domain: cd04138

>cd04138 H_N_K_Ras_like H-Ras/N-Ras/K-Ras subfamily. H-Ras, N-Ras, and K-Ras4A/4B are the prototypical members of the Ras family. These isoforms generate distinct signal outputs despite interacting with a common set of activators and effectors, and are strongly associated with oncogenic progression in tumor initiation. Mutated versions of Ras that are insensitive to GAP stimulation (and are therefore constitutively active) are found in a significant fraction of human cancers. Many Ras guanine nucleotide exchange factors (GEFs) have been identified. They are sequestered in the cytosol until activation by growth factors triggers recruitment to the plasma membrane or Golgi, where the GEF colocalizes with Ras. Active (GTP-bound) Ras interacts with several effector proteins that stimulate a variety of diverse cytoplasmic signaling activities. Some are known to positively mediate the oncogenic properties of Ras, including Raf, phosphatidylinositol 3-kinase (PI3K), RalGEFs, and Tiam1.
Probab=99.20  E-value=1e-10  Score=91.22  Aligned_cols=142  Identities=20%  Similarity=0.253  Sum_probs=96.9

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEEE-----EECCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             898623685044677788642221001231000121499-----951784388885166157899986664206805999
Q gi|254780787|r  386 VTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAYQ-----VAYQGKNITFLDTPGHAAFYEMRARGARVTDIAVLV  460 (884)
Q Consensus       386 v~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~~-----~~~~~~~~~~iDtPGh~~f~~~r~rg~~~~d~~ilv  460 (884)
T Consensus         4 vvlvGd~~VGKTsli~r~~~~~F~~~y----~~Ti~~~~~k~~~i~~~~~~l~iwDtaG~e~~~~l~~~~~~~a~~~ilv   79 (162)
T cd04138           4 LVVVGAGGVGKSALTIQLIQNHFVDEY----DPTIEDSYRKQVVIDGETCLLDILDTAGQEEYSAMRDQYMRTGEGFLCV   79 (162)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCCCCC----CCCCCCEEEEEEEECCEEEEEEEEECCCCCCCCHHHHHHHCCCCEEEEE
T ss_conf             999899998899999999839288756----8855527999999999999999997998601114789871578779999


Q ss_pred             EECCCCCCHHHHHHHHH----HH----HCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf             98366740235777898----99----70994156123312443320002210000132000123474036311002477
Q gi|254780787|r  461 LAADEEIMPQAIESINH----AK----AADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLN  532 (884)
Q Consensus       461 v~~~~g~~~qt~e~~~~----~~----~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  532 (884)
T Consensus        80 ydvt~---~~Sf~~v~~w~~~i~~~~~~~~~piilVgNK~Dl~~---r~V~~~e~--~~~a~~~--~~~f~E~SAk~~~n  149 (162)
T cd04138          80 FAINS---RKSFEDIHTYREQIKRVKDSDDVPMVLVGNKCDLAA---RTVSSRQG--QDLAKSY--GIPYIETSAKTRQG  149 (162)
T ss_pred             EECCC---HHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCHHH---CCCCHHHH--HHHHHHC--CCEEEEECCCCCCC
T ss_conf             61798---899998999999999854888854999976535645---55889999--9999980--99899973899859


Q ss_pred             CCCCCCCHH
Q ss_conf             411221000
Q gi|254780787|r  533 LDKLLDAIL  541 (884)
Q Consensus       533 ~~~~~~~~~  541 (884)
T Consensus       150 V~e~F~~l~  158 (162)
T cd04138         150 VEEAFYTLV  158 (162)
T ss_pred             HHHHHHHHH
T ss_conf             899999999