HHsearch alignment for GI: 254780787 and conserved domain: cd04159

>cd04159 Arl10_like Arl10-like subfamily. Arl9/Arl10 was identified from a human cancer-derived EST dataset. No functional information about the subfamily is available at the current time, but crystal structures of human Arl10b and Arl10c have been solved.

Probab=99.45  E-value=8.6e-13  Score=105.46  Aligned_cols=146  Identities=23%  Similarity=0.319  Sum_probs=102.6

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEECCCEE--EEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf             89862368504467778864222100123100012149--9951784388885166157899986664206805999983
Q gi|254780787|r  386 VTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAY--QVAYQGKNITFLDTPGHAAFYEMRARGARVTDIAVLVLAA  463 (884)
Q Consensus       386 v~v~ghvd~GKt~lld~~r~~~~~~~e~ggitq~iga~--~~~~~~~~~~~iDtPGh~~f~~~r~rg~~~~d~~ilvv~~  463 (884)
T Consensus         2 I~llG~~~~GKTsll~~~~~~~f~~~----~~pTig~~~~~i~~~~~~l~iwDt~G~e~~~~l~~~y~~~~~~ii~V~D~   77 (159)
T cd04159           2 ITLVGLQNSGKTTLVNVIAGGQFSED----TIPTVGFNMRKVTKGNVTLKVWDLGGQPRFRSMWERYCRGVNAIVYVVDA   77 (159)
T ss_pred             EEEECCCCCCHHHHHHHHHCCCCCCC----CCCCCCEEEEEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf             89999999869999999975999886----16732505899998999999997983587799999874686368751577


Q ss_pred             CCCCCHHHHHHHH--------HHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCC
Q ss_conf             6674023577789--------89970994156123312443320002210000132000123474036311002477411
Q gi|254780787|r  464 DEEIMPQAIESIN--------HAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDK  535 (884)
Q Consensus       464 ~~g~~~qt~e~~~--------~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  535 (884)
T Consensus        78 sd---~~s~~~~~~~l~~~~~~~~~~~~piliv~NK~Dl~~~~~~~~i~~~~~---~~~~~~~~~~~~~~SAktg~gI~e  151 (159)
T cd04159          78 AD---RTALEAAKNELHDLLEKPSLEGIPLLVLGNKNDLPGALSVDELIEQMN---LKSITDREVSCYSISCKEKTNIDI  151 (159)
T ss_pred             CC---HHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCHHHHHHHHH---HHHHHCCCCEEEEEECCCCCCHHH
T ss_conf             87---889999999999998544348982898883567643478999999999---998734998799997968969899


Q ss_pred             CCCCHH
Q ss_conf             221000
Q gi|254780787|r  536 LLDAIL  541 (884)
Q Consensus       536 ~~~~~~  541 (884)
T Consensus       152 ~f~wL~  157 (159)
T cd04159         152 VLDWLI  157 (159)
T ss_pred             HHHHHH
T ss_conf             999996