HHsearch alignment for GI: 254780787 and conserved domain: cd04160

>cd04160 Arfrp1 Arfrp1 subfamily. Arfrp1 (Arf-related protein 1), formerly known as ARP, is a membrane-associated Arf family member that lacks the N-terminal myristoylation motif. Arfrp1 is mainly associated with the trans-Golgi compartment and the trans-Golgi network, where it regulates the targeting of Arl1 and the GRIP domain-containing proteins, golgin-97 and golgin-245, onto Golgi membranes. It is also involved in the anterograde transport of the vesicular stomatitis virus G protein from the Golgi to the plasma membrane, and in the retrograde transport of TGN38 and Shiga toxin from endosomes to the trans-Golgi network. Arfrp1 also inhibits Arf/Sec7-dependent activation of phospholipase D. Deletion of Arfrp1 in mice causes embryonic lethality at the gastrulation stage and apoptosis of mesodermal cells, indicating its importance in development.
Probab=99.57  E-value=2.3e-14  Score=116.28  Aligned_cols=155  Identities=15%  Similarity=0.201  Sum_probs=106.4

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHH--HHCCCCCCEECCCE--EEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEE
Q ss_conf             89862368504467778864222--10012310001214--999517843888851661578999866642068059999
Q gi|254780787|r  386 VTIMGHVDHGKTSLLDAIRKADV--AKGEIGGITQHIGA--YQVAYQGKNITFLDTPGHAAFYEMRARGARVTDIAVLVL  461 (884)
Q Consensus       386 v~v~ghvd~GKt~lld~~r~~~~--~~~e~ggitq~iga--~~~~~~~~~~~~iDtPGh~~f~~~r~rg~~~~d~~ilvv  461 (884)
T Consensus         2 ivilG~~~~GKTsll~~l~~~~~~~~~~~~~~~~~Tvg~~~~~i~~~~~~l~iwD~~Gqe~~~~l~~~y~~~a~~ii~Vv   81 (167)
T cd04160           2 VLILGLDNAGKTTFLEQLKTLFSKYKGLPPSKITPTVGLNIGTIEVGNARLKFWDLGGQESLRSLWDKYYAECHAIIYVI   81 (167)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCEEEEEEECCCCHHHHHHHHHHCCCCCEEEEEE
T ss_conf             99999999888899998875036767776554035313268999989999999968987888789987428987899998


Q ss_pred             ECCCCC-CHHHHHHHH----HHHHCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCC
Q ss_conf             836674-023577789----899709941561233124433200022100001320001234740363110024774112
Q gi|254780787|r  462 AADEEI-MPQAIESIN----HAKAADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDKL  536 (884)
Q Consensus       462 ~~~~g~-~~qt~e~~~----~~~~~~~p~iva~nk~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  536 (884)
T Consensus        82 D~sd~~~~~~~~~~l~~~~~~~~~~~~pili~~NK~Dl~~~~~~~ei~~~~~~~~-~~~~~~~~~~~~~SAktG~Gv~e~  160 (167)
T cd04160          82 DSTDRERFEESKSALEKVLRNEALEGVPLLILANKQDLPDALSVEEIKEVFQDKA-EEIGRRDCLVLPVSALEGTGVREG  160 (167)
T ss_pred             ECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH-HHHCCCCCEEEEEECCCCCCHHHH
T ss_conf             6686788999999999975110248962999970667665778999999999999-985469989999887829498999


Q ss_pred             CCCHH
Q ss_conf             21000
Q gi|254780787|r  537 LDAIL  541 (884)
Q Consensus       537 ~~~~~  541 (884)
T Consensus       161 f~wL~  165 (167)
T cd04160         161 IEWLV  165 (167)
T ss_pred             HHHHH
T ss_conf             99996