>cd04165 GTPBP1_like GTPBP1-like. Mammalian GTP binding protein 1 (GTPBP1), GTPBP2, and nematode homologs AGP-1 and CGP-1 are GTPases whose specific functions remain unknown. In mouse, GTPBP1 is expressed in macrophages, in smooth muscle cells of various tissues and in some neurons of the cerebral cortex; GTPBP2 tissue distribution appears to overlap that of GTPBP1. In human leukemia and macrophage cell lines, expression of both GTPBP1 and GTPBP2 is enhanced by interferon-gamma (IFN-gamma). The chromosomal location of both genes has been identified in humans, with GTPBP1 located in chromosome 22q12-13.1 and GTPBP2 located in chromosome 6p21-12. Human glioblastoma multiforme (GBM), a highly-malignant astrocytic glioma and the most common cancer in the central nervous system, has been linked to chromosomal deletions and a translocation on chromosome 6. The GBM translocation results in a fusion of GTPBP2 and PTPRZ1, a protein involved in oligodendrocyte differentiation, recovery, and

Probab=99.97 E-value=4.2e-30 Score=223.85 Aligned_cols=155 Identities=25% Similarity=0.319 Sum_probs=114.3 Q ss_pred EEEEECCCCCHHHHHHHHHHHHHHH--------------CCCCCCEECCCEE------------------------EEEC Q ss_conf 8986236850446777886422210--------------0123100012149------------------------9951 Q gi|254780787|r 386 VTIMGHVDHGKTSLLDAIRKADVAK--------------GEIGGITQHIGAY------------------------QVAY 427 (884) Q Consensus 386 v~v~ghvd~GKt~lld~~r~~~~~~--------------~e~ggitq~iga~------------------------~~~~ 427 (884) T Consensus 2 v~v~GhVD~GKSTL~G~Lt~g~lDdGrg~ar~~~~rh~hE~~~G~Tssi~~~~lgf~~~g~~~~~~~~~~~~~~~~~~~~ 81 (224) T cd04165 2 VAVVGNVDAGKSTLLGVLTQGELDNGRGKARLNLFRHKHEVESGRTSSVSNEILGFDSDGEVVNYPDNHLSESDIEICEK 81 (224) T ss_pred EEEEECCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCCCCCCCCCCEEEECC T ss_conf 89994858848899999856774222106777877618999726544115655401014532021347654422012136 Q ss_pred CCCEEEEEECCCHHHHHHHHHHH--HHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCC-CHHHH Q ss_conf 78438888516615789998666--4206805999983667402357778989970994156123312443320-00221 Q gi|254780787|r 428 QGKNITFLDTPGHAAFYEMRARG--ARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKIDKLGADP-QKVRM 504 (884) Q Consensus 428 ~~~~~~~iDtPGh~~f~~~r~rg--~~~~d~~ilvv~~~~g~~~qt~e~~~~~~~~~~p~iva~nk~d~~~~~~-~~~~~ 504 (884) T Consensus 82 ~~k~it~iD~pGH~~y~kt~i~G~~~~~~d~~~LvV~A~~G~~~~T~ehl~l~~~l~ip~~vvitKiDl~~~~~l~~~~~ 161 (224) T cd04165 82 SSKLVTFIDLAGHERYLKTTLFGLTGYAPDYAMLVVAANAGIIGMTKEHLGLALALNIPVFVVVTKIDLAPANILQETLK 161 (224) T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHH T ss_conf 78679999788739999999987635568989999317889779999999999983999899998977689899999999 Q ss_pred HHHCC---------------------CCCCCCCCCCCEEEEEEECCCCCCCCCCCCH Q ss_conf 00001---------------------3200012347403631100247741122100 Q gi|254780787|r 505 SLLKH---------------------DVFVESMGGDILDVEISAKNNLNLDKLLDAI 540 (884) Q Consensus 505 ~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 540 (884) T Consensus 162 ~i~~~lk~p~~~k~p~~v~~~~d~~~~a~~~~~~~ivPIf~vS~VtG~Gi~~L~~fL 218 (224) T cd04165 162 DLKRILKVPGVRKLPVPVKSDDDVVLAASNFSSERIVPIFQVSNVTGEGLDLLHAFL 218 (224) T ss_pred HHHHHHCCCCCCCCCEECCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHH T ss_conf 999997044755687021685889999864886777467997658987999999999

HHsearch alignment for GI: 254780787 and conserved domain: cd04165