HHsearch alignment for GI: 254780787 and conserved domain: smart00174

>smart00174 RHO Rho (Ras homology) subfamily of Ras-like small GTPases. Members of this subfamily of Ras-like small GTPases include Cdc42 and Rac, as well as Rho isoforms.
Probab=99.16  E-value=1.2e-10  Score=90.81  Aligned_cols=152  Identities=16%  Similarity=0.243  Sum_probs=93.5

Q ss_pred             EEEEECCCCCHHHHHHHHHHHHHH-HCCCCCCEECCCEEEEECCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEECC
Q ss_conf             898623685044677788642221-0012310001214999517843888851661578999866642068059999836
Q gi|254780787|r  386 VTIMGHVDHGKTSLLDAIRKADVA-KGEIGGITQHIGAYQVAYQGKNITFLDTPGHAAFYEMRARGARVTDIAVLVLAAD  464 (884)
Q Consensus       386 v~v~ghvd~GKt~lld~~r~~~~~-~~e~ggitq~iga~~~~~~~~~~~~iDtPGh~~f~~~r~rg~~~~d~~ilvv~~~  464 (884)
T Consensus         1 ivllGd~~VGKTsli~r~~~~~f~~~y~~Ti~~~~~~~~~~~~~~~~l~i~DtaG~e~~~~l~~~~~~~a~~~ilvydvt   80 (174)
T smart00174        1 LVVVGDGAVGKTCLLISYTTNAFPEDYVPTVFENYSADVEVDGKPVELGLWDTAGQEDYDRLRPLSYPDTDVFLICFSVD   80 (174)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEEEEECCEEEEEEEEECCCCCCCCCCCHHHCCCCCEEEEEEECC
T ss_conf             59989789759999999953989998578505789999999999999999948987034545001104886899997589


Q ss_pred             CCCCHHHHHHHH-----HHH--HCCCCEEEECCCCCCCCCCCCHHHH--H----H-HCCC-CCCCCCCCCCEEEEEEECC
Q ss_conf             674023577789-----899--7099415612331244332000221--0----0-0013-2000123474036311002
Q gi|254780787|r  465 EEIMPQAIESIN-----HAK--AADVSIIVAINKIDKLGADPQKVRM--S----L-LKHD-VFVESMGGDILDVEISAKN  529 (884)
Q Consensus       465 ~g~~~qt~e~~~-----~~~--~~~~p~iva~nk~d~~~~~~~~~~~--~----~-~~~~-~~~~~~~~~~~~~~~~~~~  529 (884)
T Consensus        81 ~~---~Sf~~~~~~w~~~i~~~~~~~piilVgnK~DL~~~~~~~~~~~~~~~~~Vs~~~~~~~a~~~-~~~~y~EtSAk~  156 (174)
T smart00174       81 SP---ASFENVKEKWYPEVKHFCPNTPIILVGTKLDLREDKSTLRELSKQKQEPVTYEQGEALAKRI-GAVKYLECSALT  156 (174)
T ss_pred             CH---HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHC-CCCEEEEECCCC
T ss_conf             87---89999999899999986889869999875425012333545533146500299999999983-997899964588


Q ss_pred             CCCCCCCCCCHH
Q ss_conf             477411221000
Q gi|254780787|r  530 NLNLDKLLDAIL  541 (884)
Q Consensus       530 ~~~~~~~~~~~~  541 (884)
T Consensus       157 g~nV~e~F~~l~  168 (174)
T smart00174      157 QEGVREVFEEAI  168 (174)
T ss_pred             CCCHHHHHHHHH
T ss_conf             949899999999