RPSBLAST alignment for GI: 254780787 and conserved domain: TIGR00485
>gnl|CDD|129576 TIGR00485, EF-Tu, translation elongation factor TU. This alignment models orthologs of translation elongation factor EF-Tu in bacteria, mitochondria, and chloroplasts, one of several GTP-binding translation factors found by the more general pfam model GTP_EFTU. The eukaryotic conterpart, eukaryotic translation elongation factor 1 (eEF-1 alpha), is excluded from this model. EF-Tu is one of the most abundant proteins in bacteria, as well as one of the most highly conserved, and in a number of species the gene is duplicated with identical function. When bound to GTP, EF-Tu can form a complex with any (correctly) aminoacylated tRNA except those for initiation and for selenocysteine, in which case EF-Tu is replaced by other factors. Transfer RNA is carried to the ribosome in these complexes for protein translation. Length = 394
Score = 59.0 bits (143), Expect = 5e-09
Identities = 44/127 (34%), Positives = 62/127 (48%), Gaps = 21/127 (16%)
Query: 386 VTIMGHVDHGKTSLLDAIRKADVAKG--------EIG--------GITQHIGAYQVAYQG 429
+ +GHVDHGKT+L AI +G +I GIT I V Y+
Sbjct: 15 IGTIGHVDHGKTTLTAAITTVLAKEGGAAARAYDQIDNAPEEKARGIT--INTAHVEYET 72
Query: 430 KNITF--LDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADV-SII 486
+N + +D PGHA + + GA D A+LV++A + MPQ E I A+ V I+
Sbjct: 73 ENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSATDGPMPQTREHILLARQVGVPYIV 132
Query: 487 VAINKID 493
V +NK D
Sbjct: 133 VFLNKCD 139