RPSBLAST alignment for GI: 254780787 and conserved domain: cd04147
>gnl|CDD|133347 cd04147, Ras_dva, Ras-dva subfamily. Ras-dva (Ras - dorsal-ventral anterior localization) subfamily consists of a set of proteins characterized only in Xenopus leavis, to date. In Xenopus Ras-dva expression is activated by the transcription factor Otx2 and begins during gastrulation throughout the anterior ectoderm. Ras-dva expression is inhibited in the anterior neural plate by factor Xanf1. Downregulation of Ras-dva results in head development abnormalities through the inhibition of several regulators of the anterior neural plate and folds patterning, including Otx2, BF-1, Xag2, Pax6, Slug, and Sox9. Downregulation of Ras-dva also interferes with the FGF-8a signaling within the anterior ectoderm. Most Ras proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Ras proteins. Length = 198
Score = 41.3 bits (97), Expect = 0.001
Identities = 37/131 (28%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 419 HIGAYQVAYQGKNITFLDTPGHAAFYEMRARGARVTDIAVLVLAADEEIMPQAIES---- 474
H Y+V + LDT G +F MR + +D LV A D+ + +E
Sbjct: 36 HRKEYEVGGVSLTLDILDTSGSYSFPAMRKLSIQNSDAFALVYAVDDPESFEEVERLREE 95
Query: 475 INHAKA-ADVSIIVAINKIDKLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNL 533
I K V I+V NK D L + Q L + + VE SAK+N N+
Sbjct: 96 ILEVKEDKFVPIVVVGNKADSLEEERQVPAKDALS----TVELDWNCGFVETSAKDNENV 151
Query: 534 DKLLDAILLQA 544
++ +L QA
Sbjct: 152 LEVFKELLRQA 162