RPSBLAST alignment for GI: 254780787 and conserved domain: TIGR00231
>gnl|CDD|161778 TIGR00231, small_GTP, small GTP-binding protein domain. This model recognizes a large number of small GTP-binding proteins and related domains in larger proteins. Note that the alpha chains of heterotrimeric G proteins are larger proteins in which the NKXD motif is separated from the GxxxxGK[ST] motif (P-loop) by a long insert and are not easily detected by this model. Length = 161
Score = 92.4 bits (230), Expect = 5e-19
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 17/168 (10%)
Query: 383 PPVVTIMGHVDHGKTSLLDAIRKADVAKGEIGGITQHIGAYQVAYQGKNITF--LDTPGH 440
+ I+G + GK++LL+ + G T++ + GK F LDT G
Sbjct: 1 EIKIVIVGDPNVGKSTLLNRLLGNKFITEYKPGTTRNYVTTVIEEDGKTYKFNLLDTAGQ 60
Query: 441 AAF-------YEMRARGARVTDIAVLVLAADEEIMPQAIESINHAKAADVSIIVAINKID 493
+ Y RV DI +LVL +E + Q + I H ++V II+ NKID
Sbjct: 61 EDYRAIRRLYYRAVESSLRVFDIVILVLDVEEILEKQ-TKEIIHHAESNVPIILVGNKID 119
Query: 494 KLGADPQKVRMSLLKHDVFVESMGGDILDVEISAKNNLNLDKLLDAIL 541
A L H F+ + + +SA+ N+D +
Sbjct: 120 LRDAK-------LKTHVAFLFAKLNGEPIIPLSAETGKNIDSAFKIVE 160