RPSBLAST alignment for GI: 254780787 and conserved domain: cd01342

>gnl|CDD|58078 cd01342, Translation_Factor_II_like, Translation_Factor_II_like: Elongation factor Tu (EF-Tu) domain II-like proteins. Elongation factor Tu consists of three structural domains, this family represents the second domain. Domain II adopts a beta barrel structure and is involved in binding to charged tRNA. Domain II is found in other proteins such as elongation factor G and translation initiation factor IF-2. This group also includes the C2 subdomain of domain IV of IF-2 that has the same fold as domain II of (EF-Tu). Like IF-2 from certain prokaryotes such as Thermus thermophilus, mitochondrial IF-2 lacks domain II, which is thought to be involved in binding of E.coli IF-2 to 30S subunits.. Length = 83
 Score = 61.1 bits (148), Expect = 1e-09
 Identities = 30/82 (36%), Positives = 45/82 (54%), Gaps = 1/82 (1%)

Query: 793 AEVLEVFAVTKLGNVAGCKVSEGKVERGSGVRLIRNSTVIYEGKLKTLKRFKDEVSEVHA 852
           A V +VF     G VA  +V  G +++G  VR+      + +GK+K+LKRFK EV E  A
Sbjct: 3   ALVFKVFKDKGRGTVATGRVESGTLKKGDKVRVGPGGGGV-KGKVKSLKRFKGEVDEAVA 61

Query: 853 GQDCGMAFEKYDNIQAGDMIEC 874
           G   G+  +  D+I+ GD +  
Sbjct: 62  GDIVGIVLKDKDDIKIGDTLTD 83