HHsearch alignment for GI: 254780788 and conserved domain: PRK04163

>PRK04163 exosome complex RNA-binding protein Rrp4; Provisional.
Probab=96.14  E-value=0.025  Score=36.43  Aligned_cols=63  Identities=22%  Similarity=0.384  Sum_probs=52.1

Q ss_pred             HHHHHHCCCEEEEEEEECCCCEEEEEEC-CCEEEEEHHHCCC----------CCCCCCCCEEEEEEEEECCCCC
Q ss_conf             9998520838999998405763899957-9358744787488----------7511527669999976113587
Q gi|254780788|r  132 LEFKDKVGEIISGTVKRVEYGNVIVDLG-NSDGVIRRDETIS----------RENLRPGDRVKSYIYDVRREQR  194 (526)
Q Consensus       132 ~ef~~r~Geiv~G~V~r~e~~~iiVdlg-~~ea~Lp~~e~ip----------~E~~~~Gdrika~i~~V~~~~r  194 (526)
T Consensus        56 grY~P~~GD~VIG~V~~v~~~~W~VDI~s~~~a~L~~s~~~~r~~~~~~~~mr~~l~~GDlI~ArV~~v~~~~~  129 (232)
T PRK04163         56 GKYIPKKGDLVIGKVTDVGFSGWEVDINSPYKAILPVSEVLGRPVDVESTDLRKYLDIGDYIIAKVKDVDETKD  129 (232)
T ss_pred             CCCCCCCCCEEEEEEEEECCCEEEEECCCCCEEEECHHHCCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCCCC
T ss_conf             51058769989999998318717998699605585244456655556435677517889889999999668997