HHsearch alignment for GI: 254780788 and conserved domain: PRK06299

>PRK06299 rpsA 30S ribosomal protein S1; Reviewed.
Probab=98.46  E-value=8.6e-06  Score=61.83  Aligned_cols=64  Identities=19%  Similarity=0.357  Sum_probs=35.8

Q ss_pred             CCCEEEEEEEECCCCEEEEEECCCEEEEEHHHCCCC--C--CCCCCCEEEEEEEEECCCCCEEEEEEECC
Q ss_conf             083899999840576389995793587447874887--5--11527669999976113587028987159
Q gi|254780788|r  138 VGEIISGTVKRVEYGNVIVDLGNSDGVIRRDETISR--E--NLRPGDRVKSYIYDVRREQRGPQVLLSRT  203 (526)
Q Consensus       138 ~Geiv~G~V~r~e~~~iiVdlg~~ea~Lp~~e~ip~--E--~~~~Gdrika~i~~V~~~~rgpqi~lSRt  203 (526)
T Consensus       104 ~~~~v~g~i~~~vKGG~~V~i~gv~aFlP~Sq~d~~~v~d~~~~vG~~l~~kIi~~d~~~~--~iVvSrr  171 (556)
T PRK06299        104 NGEIVEGVINGKVKGGFTVDLNGVRAFLPGSQVDVRPVRDTDPLEGKELEFKVIKLDKKRN--NIVVSRR  171 (556)
T ss_pred             CCCEEEEEEEEEECCEEEEEECCEEEEEEHHHCCCCCCCCHHHHCCCEEEEEEEEEECCCC--EEEEEHH
T ss_conf             8987999999997780999988989997858825755566176579669999999752358--0897328