HHsearch alignment for GI: 254780788 and conserved domain: PRK07400
>PRK07400 30S ribosomal protein S1; Reviewed.
Probab=98.18 E-value=1.3e-05 Score=60.44 Aligned_cols=78 Identities=26% Similarity=0.401 Sum_probs=64.1
Q ss_pred HHHHH--HHHCCCEEEEEEEECCCCEEEEEEC-CCEEEEEHHHC------CCCCCCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf 79999--8520838999998405763899957-93587447874------887511527669999976113587028987
Q gi|254780788|r 130 QYLEF--KDKVGEIISGTVKRVEYGNVIVDLG-NSDGVIRRDET------ISRENLRPGDRVKSYIYDVRREQRGPQVLL 200 (526)
Q Consensus 130 i~~ef--~~r~Geiv~G~V~r~e~~~iiVdlg-~~ea~Lp~~e~------ip~E~~~~Gdrika~i~~V~~~~rgpqi~l 200 (526)
T Consensus 21 lLe~~~~~~k~GdiVeG~V~~I~~~~v~VdiG~k~eG~i~~~E~s~~~~~~~~e~~~vGd~iev~V~~~~~~~g--~i~L 98 (314)
T PRK07400 21 LLDKYDYHFKPGDIVNGTVFSLEPKGALIDIGAKTAAFMPLQEMSINRVEGPSEVLQPGETREFFILSEENEDG--QLTL 98 (314)
T ss_pred HHHHHHCCCCCCCEEEEEEEEEECCEEEEEECCCEEEEEEHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCC--CEEE
T ss_conf 99875236999998999999997998999977980799999993666568943013589769999999856889--6899
Q ss_pred ECCCHHHHH
Q ss_conf 159889999
Q gi|254780788|r 201 SRTHPQFMV 209 (526)
Q Consensus 201 SRt~p~~l~ 209 (526)
T Consensus 99 S~k~~~~~~ 107 (314)
T PRK07400 99 SIRRIEYMR 107 (314)
T ss_pred EECHHHHHH
T ss_conf 860432120