HHsearch alignment for GI: 254780788 and conserved domain: PRK07400

>PRK07400 30S ribosomal protein S1; Reviewed.
Probab=98.18  E-value=1.3e-05  Score=60.44  Aligned_cols=78  Identities=26%  Similarity=0.401  Sum_probs=64.1

Q ss_pred             HHHHH--HHHCCCEEEEEEEECCCCEEEEEEC-CCEEEEEHHHC------CCCCCCCCCCEEEEEEEEECCCCCEEEEEE
Q ss_conf             79999--8520838999998405763899957-93587447874------887511527669999976113587028987
Q gi|254780788|r  130 QYLEF--KDKVGEIISGTVKRVEYGNVIVDLG-NSDGVIRRDET------ISRENLRPGDRVKSYIYDVRREQRGPQVLL  200 (526)
Q Consensus       130 i~~ef--~~r~Geiv~G~V~r~e~~~iiVdlg-~~ea~Lp~~e~------ip~E~~~~Gdrika~i~~V~~~~rgpqi~l  200 (526)
T Consensus        21 lLe~~~~~~k~GdiVeG~V~~I~~~~v~VdiG~k~eG~i~~~E~s~~~~~~~~e~~~vGd~iev~V~~~~~~~g--~i~L   98 (314)
T PRK07400         21 LLDKYDYHFKPGDIVNGTVFSLEPKGALIDIGAKTAAFMPLQEMSINRVEGPSEVLQPGETREFFILSEENEDG--QLTL   98 (314)
T ss_pred             HHHHHHCCCCCCCEEEEEEEEEECCEEEEEECCCEEEEEEHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCC--CEEE
T ss_conf             99875236999998999999997998999977980799999993666568943013589769999999856889--6899


Q ss_pred             ECCCHHHHH
Q ss_conf             159889999
Q gi|254780788|r  201 SRTHPQFMV  209 (526)
Q Consensus       201 SRt~p~~l~  209 (526)
T Consensus        99 S~k~~~~~~  107 (314)
T PRK07400         99 SIRRIEYMR  107 (314)
T ss_pred             EECHHHHHH
T ss_conf             860432120