HHsearch alignment for GI: 254780788 and conserved domain: PRK07956
>PRK07956 ligA NAD-dependent DNA ligase LigA; Validated.
Probab=97.53 E-value=0.00061 Score=48.21 Aligned_cols=99 Identities=21% Similarity=0.314 Sum_probs=69.6
Q ss_pred CCCCCCCHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH--C
Q ss_conf 1225888467888877321-114777505888877653058899999999999999999999898775428435664--0
Q gi|254780788|r 363 MQAINVDEIIAHLLVAEGF-ADVEELACVKISEIASIEGFDEETAVEIQGRAREYLEGIDITLQKKIRELGVSEELC--S 439 (526)
Q Consensus 363 ~e~LdVDE~iA~~LV~eGf-~SiEeIa~a~~eeL~~IeGfdee~a~eL~~rA~~~L~~~~~~~~e~~~e~~~~e~L~--~ 439 (526)
T Consensus 448 mdI~GlG~~~i~~L~~~g~i~~~~Diy~L~~~~L~~l~gfgeKsa~nLl~aIe~---------S---K~~~l~r~L~ALG 515 (668)
T PRK07956 448 MDIDGLGEKIIEQLFEKGLIHTPADLFKLTEEDLLQLEGFGEKSAQNLLDAIEK---------S---KETPLARFLYALG 515 (668)
T ss_pred CCCCCCCHHHHHHHHHCCCCCCHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHH---------H---CCCCHHHHHHHCC
T ss_conf 164665999999998768766589997288545402123556699999999998---------5---4775888998627
Q ss_pred CCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHCCCC
Q ss_conf 77999899999998798478896532677521231
Q gi|254780788|r 440 IPGIDSKIKVALGENGIKTMEDLAGCSVDDLLGWS 474 (526)
Q Consensus 440 l~gl~~~~~~~L~e~gIktleDlAels~dEL~~~~ 474 (526)
T Consensus 516 I~~VG~~~Ak~La~~-f~sl~~l~~as~e~L~~I~ 549 (668)
T PRK07956 516 IRHVGEKAAKALARH-FGSLEALEAASEEELAAVE 549 (668)
T ss_pred CCCCCHHHHHHHHHH-HCCHHHHHHCCHHHHHCCC
T ss_conf 864129999999999-6689999708999985768