HHsearch alignment for GI: 254780788 and conserved domain: PRK07956

>PRK07956 ligA NAD-dependent DNA ligase LigA; Validated.
Probab=97.53  E-value=0.00061  Score=48.21  Aligned_cols=99  Identities=21%  Similarity=0.314  Sum_probs=69.6

Q ss_pred             CCCCCCCHHHHHHHHHHHH-HHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH--C
Q ss_conf             1225888467888877321-114777505888877653058899999999999999999999898775428435664--0
Q gi|254780788|r  363 MQAINVDEIIAHLLVAEGF-ADVEELACVKISEIASIEGFDEETAVEIQGRAREYLEGIDITLQKKIRELGVSEELC--S  439 (526)
Q Consensus       363 ~e~LdVDE~iA~~LV~eGf-~SiEeIa~a~~eeL~~IeGfdee~a~eL~~rA~~~L~~~~~~~~e~~~e~~~~e~L~--~  439 (526)
T Consensus       448 mdI~GlG~~~i~~L~~~g~i~~~~Diy~L~~~~L~~l~gfgeKsa~nLl~aIe~---------S---K~~~l~r~L~ALG  515 (668)
T PRK07956        448 MDIDGLGEKIIEQLFEKGLIHTPADLFKLTEEDLLQLEGFGEKSAQNLLDAIEK---------S---KETPLARFLYALG  515 (668)
T ss_pred             CCCCCCCHHHHHHHHHCCCCCCHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHH---------H---CCCCHHHHHHHCC
T ss_conf             164665999999998768766589997288545402123556699999999998---------5---4775888998627


Q ss_pred             CCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHCCCC
Q ss_conf             77999899999998798478896532677521231
Q gi|254780788|r  440 IPGIDSKIKVALGENGIKTMEDLAGCSVDDLLGWS  474 (526)
Q Consensus       440 l~gl~~~~~~~L~e~gIktleDlAels~dEL~~~~  474 (526)
T Consensus       516 I~~VG~~~Ak~La~~-f~sl~~l~~as~e~L~~I~  549 (668)
T PRK07956        516 IRHVGEKAAKALARH-FGSLEALEAASEEELAAVE  549 (668)
T ss_pred             CCCCCHHHHHHHHHH-HCCHHHHHHCCHHHHHCCC
T ss_conf             864129999999999-6689999708999985768