HHsearch alignment for GI: 254780788 and conserved domain: PRK08406
>PRK08406 transcription elongation factor NusA-like protein; Validated.
Probab=97.26 E-value=0.00064 Score=48.06 Aligned_cols=70 Identities=26% Similarity=0.490 Sum_probs=56.7
Q ss_pred ECCCCHHHHHH--HHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCH
Q ss_conf 55987899999--76286654248987567879999853422110254427899999861674578552200
Q gi|254780788|r 278 VWSPDSATFVI--NALRPAIVTKVVLDEDVGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIITEEED 347 (526)
Q Consensus 278 ~ws~d~~~fi~--nAl~PA~v~~v~~de~~~~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi~~~~~~ 347 (526)
T Consensus 4 ~l~~e~~ryi~lFe~~T~~~~~DCi~d~~~~riiFvV~~g~mG~AIGk~G~~Ik~l~~~lgkkIdiVe~seD 75 (142)
T PRK08406 4 KLTTEEIRYIALFESITGATVRDCIIDEEYDRIIFVVKEGDMGLAIGKGGENVKRLKEKLGKDIELVEYSED 75 (142)
T ss_pred EECHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCC
T ss_conf 988899999999999879972356870899889999876768897587960799999985894589964789