HHsearch alignment for GI: 254780788 and conserved domain: PRK08406

>PRK08406 transcription elongation factor NusA-like protein; Validated.
Probab=97.26  E-value=0.00064  Score=48.06  Aligned_cols=70  Identities=26%  Similarity=0.490  Sum_probs=56.7

Q ss_pred             ECCCCHHHHHH--HHCCCCCCCEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCH
Q ss_conf             55987899999--76286654248987567879999853422110254427899999861674578552200
Q gi|254780788|r  278 VWSPDSATFVI--NALRPAIVTKVVLDEDVGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIITEEED  347 (526)
Q Consensus       278 ~ws~d~~~fi~--nAl~PA~v~~v~~de~~~~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi~~~~~~  347 (526)
T Consensus         4 ~l~~e~~ryi~lFe~~T~~~~~DCi~d~~~~riiFvV~~g~mG~AIGk~G~~Ik~l~~~lgkkIdiVe~seD   75 (142)
T PRK08406          4 KLTTEEIRYIALFESITGATVRDCIIDEEYDRIIFVVKEGDMGLAIGKGGENVKRLKEKLGKDIELVEYSED   75 (142)
T ss_pred             EECHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCHHHHHHCCCCCHHHHHHHHHCCCEEEEECCCC
T ss_conf             988899999999999879972356870899889999876768897587960799999985894589964789