HHsearch alignment for GI: 254780788 and conserved domain: PTZ00162

>PTZ00162 RNA polymerase II subunit 7; Provisional.
Probab=96.67  E-value=0.011  Score=39.07  Aligned_cols=72  Identities=14%  Similarity=0.193  Sum_probs=56.0

Q ss_pred             HHHHCCCEEEEEEEECCCCEEEEEECCCEEEEEHHHCCCC----------------CCCCCCCEEEEEEEEECCCCCEEE
Q ss_conf             9852083899999840576389995793587447874887----------------511527669999976113587028
Q gi|254780788|r  134 FKDKVGEIISGTVKRVEYGNVIVDLGNSDGVIRRDETISR----------------ENLRPGDRVKSYIYDVRREQRGPQ  197 (526)
Q Consensus       134 f~~r~Geiv~G~V~r~e~~~iiVdlg~~ea~Lp~~e~ip~----------------E~~~~Gdrika~i~~V~~~~rgpq  197 (526)
T Consensus        77 fkP~~~EVvdg~V~~v~~~G~fv~~GPl~~fv~~s~i~~d~~yd~~~~~~~~~~~~~~i~kgd~VR~rIvg~~~~~~~~~  156 (170)
T PTZ00162         77 FKPFKDEVLDAIVTDVNKLGFFAQAGPLKIFVSRTAIPPNFVYDSDSAYPCFSDGTISIKPQSEVRLRLQGIRYDNSNLF  156 (170)
T ss_pred             EECCCCCEEEEEEEEEECCEEEEEECCEEEEEEHHHCCCCCEECCCCCCCEECCCCCEECCCCEEEEEEEEEEECCCCCE
T ss_conf             93367989999999996407999912808998989999864897899860482788388889999999999873556746


Q ss_pred             EEEECCCH
Q ss_conf             98715988
Q gi|254780788|r  198 VLLSRTHP  205 (526)
Q Consensus       198 i~lSRt~p  205 (526)
T Consensus       157 aigtm~~d  164 (170)
T PTZ00162        157 AIATINSD  164 (170)
T ss_pred             EEEEECCC
T ss_conf             99996687