HHsearch alignment for GI: 254780788 and conserved domain: TIGR03491
>TIGR03491 RecB family nuclease, putative, TM0106 family. Members of this uncharacterized protein family are found broadly but sporadically among bacteria. The N-terminal region is homologous to the Cas4 protein of CRISPR systems, although this protein family shows no signs of association with CRISPR repeats.
Probab=95.25 E-value=0.042 Score=34.69 Aligned_cols=58 Identities=21% Similarity=0.238 Sum_probs=51.0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 1122588846788887732111477750588887765305889999999999999999
Q gi|254780788|r 362 FMQAINVDEIIAHLLVAEGFADVEELACVKISEIASIEGFDEETAVEIQGRAREYLEG 419 (526)
Q Consensus 362 f~e~LdVDE~iA~~LV~eGf~SiEeIa~a~~eeL~~IeGfdee~a~eL~~rA~~~L~~ 419 (526)
T Consensus 209 LslVagi~~~q~~~L~~~GI~Ti~~LA~~~~~~l~~~~~~~~~~~~~l~~qA~a~~~~ 266 (457)
T TIGR03491 209 LSLVPGIGPSRYRLLQELGIHTLEDLAAADPNDLEDFGEQGLGVAEQLVQQARAQLEG 266 (457)
T ss_pred HHHHCCCCHHHHHHHHHCCCCCHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 7660599999999999859987999862994330356663669999999999984379