>TIGR03675 arCOG00543 arCOG01782 universal archaeal KH-domain/beta-lactamase-domain protein. This family of proteins is universal in the archaea and consistsof an N-terminal type-1 KH-domain (pfam00013) a central beta-lactamase-domain (pfam00753) with a C-terminal motif associated with RNA metabolism (pfam07521). KH-domains are associated with RNA-binding, so taken together, this protein is a likely metal-dependent RNAase. This family was defined in as arCOG01782.

Probab=91.47 E-value=0.72 Score=25.62 Aligned_cols=161 Identities=12% Similarity=0.164 Sum_probs=75.9 Q ss_pred HHHHHCCCCCCCE-EEEECCCCCEEEEEEEE--EEECCCCCCCCEECHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHH Q ss_conf 9996136874535-99974998839999998--85176778753234899986288986473799850845620799999 Q gi|254780788|r 37 KAARSLYGTMSDI-RVEINPETGDISLFRLL--EVVEEVENYTCQISLKVARDRDPSIDIGGVVSDPLPPMDFGRVAVQS 113 (526) Q Consensus 37 ~a~kK~~~~~~~i-~V~iD~~tG~i~i~~~~--~VVedved~~~eI~l~~A~~~~~~~~iGD~i~~~i~~~~fgRiaAq~ 113 (526) T Consensus 73 ~~i~~~vp~~a~i~~~~fd~~~~ev~i~~~kpg~~~g~~g~-----~~---~~i~--~~~gw~~~v~r~p~~~s~~-~~~ 141 (630) T TIGR03675 73 EKIKEIVPEEAGITDIYFDDVTGEVIIEAEKPGLVIGKGGS-----TL---REIT--AETGWTPKVVRTPPIESKT-IKN 141 (630) T ss_pred HHHHHHCCCCCCCEEEEECCCCCEEEEEECCCEEEECCCCH-----HH---HHHH--HHHCCEEEEEECCCCCHHH-HHH T ss_conf 99997589535841589748972799997796367647516-----79---9999--9749746888659997078-999 Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCC-EEE-------------------EEEEECCCCEEEEEECC-----CEEEEEHH Q ss_conf 999999999999988779999852083-899-------------------99984057638999579-----35874478 Q gi|254780788|r 114 AKQVIIQKVREAERDRQYLEFKDKVGE-IIS-------------------GTVKRVEYGNVIVDLGN-----SDGVIRRD 168 (526) Q Consensus 114 AKQvI~QkireaEr~~i~~ef~~r~Ge-iv~-------------------G~V~r~e~~~iiVdlg~-----~ea~Lp~~ 168 (526) T Consensus 142 ir~~~~~~--~~~r~~~l~~~g~~i~r~~~~~~~~vrit~LG~~~eVGRSc~l~~~~~~~illDcG~~~~~~~~~~~P~~ 219 (630) T TIGR03675 142 IREYLRSE--SEERKEFLRKLGRRIHRDPIFKDRWVRVTALGGFREVGRSALLLSTPESRILLDCGVNVGANGDNAYPYL 219 (630) T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCCCC T ss_conf 99999970--7999999999888746897688974999834676702645899963981799988888777775458865 Q ss_pred HCCCCCCCCCCCEEEEEEEE-------------ECCCCCEEEEEEECCCHHHHHHHHHHH Q ss_conf 74887511527669999976-------------113587028987159889999999976 Q gi|254780788|r 169 ETISRENLRPGDRVKSYIYD-------------VRREQRGPQVLLSRTHPQFMVKLFHME 215 (526) Q Consensus 169 e~ip~E~~~~Gdrika~i~~-------------V~~~~rgpqi~lSRt~p~~l~~Lf~~E 215 (526) T Consensus 220 d-~~e--~~-~~~IDAVvlTHAHLDH~G~LP~L~k~Gf~Gp-Iy~T~pT~dL~~llL~D~ 274 (630) T TIGR03675 220 D-VPE--FQ-LDELDAVVITHAHLDHSGLVPLLFKYGYDGP-VYCTPPTRDLMTLLQLDY 274 (630) T ss_pred C-CCC--CC-CCCCCEEEEECCCCCCCCCCCHHHHCCCCCC-EEECHHHHHHHHHHHHHH T ss_conf 6-777--98-0118589983353212563218876488898-886545999999999989

HHsearch alignment for GI: 254780788 and conserved domain: TIGR03675