>cd02396 PCBP_like_KH K homology RNA-binding domain, PCBP_like. Members of this group possess KH domains in a tandem arrangement. Most members, similar to the poly(C) binding proteins (PCBPs) and Nova, containing three KH domains, with the first and second domains, which are represented here, in tandem arrangement, followed by a large spacer region, with the third domain near the C-terminal end of the protein. The poly(C) binding proteins (PCBPs) can be divided into two groups, hnRNPs K/J and the alphaCPs, which share a triple KH domain configuration and poly(C) binding specificity. They play roles in mRNA stabilization, translational activation, and translational silencing. Nova-1 and Nova-2 are nuclear RNA-binding proteins that regulate splicing. This group also contains plant proteins that seem to have two tandem repeat arrrangements, like Hen4, a protein that plays a role in AGAMOUS (AG) pre-mRNA processing and important step in plant development. In general, KH binds single-stran

Probab=91.99  E-value=0.18  Score=30.07  Aligned_cols=39  Identities=23%  Similarity=0.406  Sum_probs=34.9

Q ss_pred             EEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECC
Q ss_conf             799998534221102544278999998616745785522
Q gi|254780788|r  307 RIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIITEE  345 (526)
Q Consensus       307 ~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi~~~~  345 (526)
T Consensus         1 t~rilvP~~~vG~vIGk~G~~I~~i~~~sga~I~i~~~~   39 (65)
T cd02396           1 TLRLLVPSSQAGSIIGKGGSTIKEIREETGAKIRVSKSV   39 (65)
T ss_pred             CEEEEEEHHHEEEEECCCCHHHHHHHHHHCCEEEECCCC
T ss_conf             989998746722899799878999999849889999889