HHsearch results for GI: 254780788 and protein with PDBid: 1b22_A
>1b22_A DNA repair protein RAD51; DNA binding, riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: a.60.4.1
Probab=95.94 E-value=0.0027 Score=41.89 Aligned_cols=55 Identities=20% Similarity=0.285 Sum_probs=49.7
Q ss_pred CCCCCCHHHHHHHHHCCCCCHHHHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 077999899999998798478896532677521231234443211245334358899999999998412257
Q gi|254780788|r 439 SIPGIDSKIKVALGENGIKTMEDLAGCSVDDLLGWSENKGGNIEKFDGFLSSLGTPKDQVESMIIHARYKMG 510 (526)
Q Consensus 439 ~l~gl~~~~~~~L~e~gIktleDlAels~dEL~~~~~~~~~~~~~~~gil~~~~l~~~~A~~lIM~AR~~~g 510 (526)
...|+++..+.+|.++|+.|++++|..+..+|..+. |+++..|.++|-.||+.++
T Consensus 29 ~~~Gvg~~~i~KL~~aG~~Tv~~Ia~~t~~eL~~i~-----------------Gi~e~~A~KIi~aark~~~ 83 (114)
T 1b22_A 29 EQCGINANDVKKLEEAGFHTVEAVAYAPKKELINIK-----------------GISEAKADKILAEAAKLVP 83 (114)
T ss_dssp HHTTCSHHHHHHHHTTCCSSGGGBTSSBHHHHHTTT-----------------TCSTTHHHHHHHHHHHHSC
T ss_pred HHCCCCHHHHHHHHHCCCCHHHHHHHCCHHHHHHCC-----------------CCCHHHHHHHHHHHHHHCC
T ss_conf 768999999999999697449999848999997666-----------------9889999999999998747