HHsearch results for GI: 254780788 and protein with PDBid: 1ec6_A

>1ec6_A RNA-binding protein NOVA-2; KH domain, alpha-beta fold, RNA-binding motif, protein/RNA structure, RNA binding protein/RNA complex; 2.40A {Homo sapiens} SCOP: d.51.1.1

Probab=91.21  E-value=0.14  Score=29.19  Aligned_cols=40  Identities=25%  Similarity=0.426  Sum_probs=35.8

Q ss_pred             CEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECC
Q ss_conf             8799998534221102544278999998616745785522
Q gi|254780788|r  306 GRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIITEE  345 (526)
Q Consensus       306 ~~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi~~~~  345 (526)
                      ..+.+.||.+....-|||+|.|+|--.+-||-+|+|....
T Consensus         3 ~~vei~VP~~~vg~iIGk~G~~Ik~I~~~tg~~I~i~~~~   42 (87)
T 1ec6_A            3 ELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKG   42 (87)
T ss_dssp             SEEEEEEEHHHHHHHHCGGGHHHHHHHHHHCCEEEECCTT
T ss_pred             EEEEEEECHHHCCEEECCCCHHHHHHHHHHCCEEEEECCC
T ss_conf             6999993974446369969868999999879899980687