HHsearch results for GI: 254780788 and protein with PDBid: 1j4w_A
>1j4w_A FUSE binding protein; single-stranded DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: d.51.1.1 d.51.1.1
Probab=96.08 E-value=0.0058 Score=39.45 Aligned_cols=96 Identities=17% Similarity=0.273 Sum_probs=60.4
Q ss_pred CCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHH----------HHH----------HHHCCCCCC------------
Q ss_conf 812765548862178899862778267995598789----------999----------976286654------------
Q gi|254780788|r 249 DPVGACVGMRGSRVQAVVTELRDEKIDIVVWSPDSA----------TFV----------INALRPAIV------------ 296 (526)
Q Consensus 249 DpVGAcVG~rGsRiq~I~~EL~gEkIDii~ws~d~~----------~fi----------~nAl~PA~v------------ 296 (526)
+-+|..||.+|+.|+.+.++- |=+|++-.-..++. .-+ .+...+...
T Consensus 12 ~~vG~IIGk~G~~Ik~i~~~t-g~~I~i~~~~~~~~~~~v~i~g~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 90 (174)
T 1j4w_A 12 FAVGIVIGRNGEMIKKIQNDA-GVRIQFKPDDGTTPERIAQITGPPDRAQHAAEIITDLLRSVQAGNPGGPGPGGRGRGR 90 (174)
T ss_dssp HHHHHHHCGGGHHHHHHHHHH-CCEEEEECCTTSCSEEEEEEEECHHHHHHHHHHHHHHHHHHC----------------
T ss_pred HHHCEEECCCCHHHHHHHHHH-CCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf 450357999997999999987-9937863467888851564047757788889989988876652023454212233333
Q ss_pred ----CEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECC
Q ss_conf ----2489875678799998534221102544278999998616745785522
Q gi|254780788|r 297 ----TKVVLDEDVGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIITEE 345 (526)
Q Consensus 297 ----~~v~~de~~~~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi~~~~ 345 (526)
.............+.||.++++..||++|.|+|-....||-+|+|....
T Consensus 91 ~~~~~~~~~~~~~~~~~i~vp~~~~~~iIG~~G~~i~~i~~~tga~I~i~~~~ 143 (174)
T 1j4w_A 91 GQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNP 143 (174)
T ss_dssp -------------CEEEEEEETTTHHHHHCGGGHHHHHHHHHHCCEEEEECCC
T ss_pred CCCCCCCCCCCCCCEEEEEECHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCC
T ss_conf 33434567766551299998878765736999837999999709989967888