HHsearch results for GI: 254780788 and protein with PDBid: 1j4w_A

>1j4w_A FUSE binding protein; single-stranded DNA binding protein; HET: DNA; NMR {Homo sapiens} SCOP: d.51.1.1 d.51.1.1
Probab=96.08  E-value=0.0058  Score=39.45  Aligned_cols=96  Identities=17%  Similarity=0.273  Sum_probs=60.4

Q ss_pred             CCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHH----------HHH----------HHHCCCCCC------------
Q ss_conf             812765548862178899862778267995598789----------999----------976286654------------
Q gi|254780788|r  249 DPVGACVGMRGSRVQAVVTELRDEKIDIVVWSPDSA----------TFV----------INALRPAIV------------  296 (526)
Q Consensus       249 DpVGAcVG~rGsRiq~I~~EL~gEkIDii~ws~d~~----------~fi----------~nAl~PA~v------------  296 (526)
                      +-+|..||.+|+.|+.+.++- |=+|++-.-..++.          .-+          .+...+...            
T Consensus        12 ~~vG~IIGk~G~~Ik~i~~~t-g~~I~i~~~~~~~~~~~v~i~g~~~~~~~a~~~i~~~~~~~~~~~~~~~~~~~~~~~~   90 (174)
T 1j4w_A           12 FAVGIVIGRNGEMIKKIQNDA-GVRIQFKPDDGTTPERIAQITGPPDRAQHAAEIITDLLRSVQAGNPGGPGPGGRGRGR   90 (174)
T ss_dssp             HHHHHHHCGGGHHHHHHHHHH-CCEEEEECCTTSCSEEEEEEEECHHHHHHHHHHHHHHHHHHC----------------
T ss_pred             HHHCEEECCCCHHHHHHHHHH-CCCEEEECCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
T ss_conf             450357999997999999987-9937863467888851564047757788889989988876652023454212233333


Q ss_pred             ----CEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECC
Q ss_conf             ----2489875678799998534221102544278999998616745785522
Q gi|254780788|r  297 ----TKVVLDEDVGRIEVIVPKEQLSLAIGRRGQNVRLASQLTGWTIDIITEE  345 (526)
Q Consensus       297 ----~~v~~de~~~~~~v~v~~~qls~AIGk~GqNvrLas~Ltg~~idi~~~~  345 (526)
                          .............+.||.++++..||++|.|+|-....||-+|+|....
T Consensus        91 ~~~~~~~~~~~~~~~~~i~vp~~~~~~iIG~~G~~i~~i~~~tga~I~i~~~~  143 (174)
T 1j4w_A           91 GQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNP  143 (174)
T ss_dssp             -------------CEEEEEEETTTHHHHHCGGGHHHHHHHHHHCCEEEEECCC
T ss_pred             CCCCCCCCCCCCCCEEEEEECHHHHHHHCCCCCHHHHHHHHHCCCEEEECCCC
T ss_conf             33434567766551299998878765736999837999999709989967888