HHsearch results for GI: 254780788 and protein with PDBid: 1k0r_A
>1k0r_A NUSA; two component arrangement, S1 domain, two K-homology domains., structural genomics, PSI, protein structure initiative; 1.70A {Mycobacterium tuberculosis} SCOP: b.40.4.5 d.52.3.1 d.52.3.1 d.202.1.1
Probab=100.00 E-value=0 Score=873.20 Aligned_cols=337 Identities=38% Similarity=0.630 Sum_probs=313.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEEEEECCCCCCCCEECHHH
Q ss_conf 88899999999998623999999999999999999961368745359997499883999999885176778753234899
Q gi|254780788|r 4 ANRLELLQIADAVAYEKSIDRDVVLSVMADSIQKAARSLYGTMSDIRVEINPETGDISLFRLLEVVEEVENYTCQISLKV 83 (526)
Q Consensus 4 ~~~~ell~vie~va~EK~I~~e~i~~aie~Al~~a~kK~~~~~~~i~V~iD~~tG~i~i~~~~~VVedved~~~eI~l~~ 83 (526)
+++.+ |.+++++|+||||+++.+++|+++||.+||||+||.+.+++|.||++||++++|..+ ++
T Consensus 19 ~M~~d-L~aL~~la~EKgI~~e~vi~aieeAl~~AykK~~g~~~~i~V~ID~~tG~i~V~~~e--~d------------- 82 (366)
T 1k0r_A 19 HMNID-MAALHAIEVDRGISVNELLETIKSALLTAYRHTQGHQTDARIEIDRKTGVVRVIARE--TD------------- 82 (366)
T ss_dssp CCSCC-CCSSGGGSSBTTBCSSTTTTSSTTTTTSSGGGSSSCCSSCCCCCCSSSCCCCCCEEC--CC-------------
T ss_pred HCHHH-HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCEEEEEEEE--CC-------------
T ss_conf 15488-999999998729999999999999999999752398677799998889759999984--35-------------
Q ss_pred HHHHCCCCCCCCEE-EEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCE----EEEEE
Q ss_conf 98628898647379-98508456207999999999999999999887799998520838999998405763----89995
Q gi|254780788|r 84 ARDRDPSIDIGGVV-SDPLPPMDFGRVAVQSAKQVIIQKVREAERDRQYLEFKDKVGEIISGTVKRVEYGN----VIVDL 158 (526)
Q Consensus 84 A~~~~~~~~iGD~i-~~~i~~~~fgRiaAq~AKQvI~QkireaEr~~i~~ef~~r~Geiv~G~V~r~e~~~----iiVdl 158 (526)
+.|+.+ +.+.+|.+|||||||+|||+|.||||++||+++|++|++|+|+||+|+|+|+++++ ++|||
T Consensus 83 --------e~~d~i~e~~~~p~~FgRiAaq~AKQvI~QkIREaEre~I~~ef~~k~GeIVtG~V~r~e~~~~~~~viVdL 154 (366)
T 1k0r_A 83 --------EAGNLISEWDDTPEGFGRIAATTARQVMLQRFRDAENERTYGEFSTREGEIVAGVIQRDSRANARGLVVVRI 154 (366)
T ss_dssp --------SSSSCCCEECCCCTTSTTTTTTTTTHHHHHHHHCCC--------CCCTTCEEEEEEECCHHHHHTTCEEEEE
T ss_pred --------CCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCEEEEEEC
T ss_conf --------788564351479678609999999999999999999999999999753976888999985588615999973
Q ss_pred CC----CEEEEEHHHCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCEEEEEEEECCCC
Q ss_conf 79----35874478748875115276699999761135870289871598899999999766777558087856631677
Q gi|254780788|r 159 GN----SDGVIRRDETISRENLRPGDRVKSYIYDVRREQRGPQVLLSRTHPQFMVKLFHMEVPEIYNGIVQVKAVSRDPG 234 (526)
Q Consensus 159 g~----~ea~Lp~~e~ip~E~~~~Gdrika~i~~V~~~~rgpqi~lSRt~p~~l~~Lf~~EVPEI~~G~ieIk~iaR~pG 234 (526)
|+ +||+||++||||+|+|++||||||||++|+.++|||||+||||||+||++||++|||||++|+|+||+|||+||
T Consensus 155 g~~~~~~EaiLP~~EqIp~E~y~~Gdrika~I~eV~~~~~g~~IilSRt~p~fv~~Lfe~EVPEI~dG~VeIk~IaRepG 234 (366)
T 1k0r_A 155 GTETKASEGVIPAAEQVPGESYEHGNRLRCYVVGVTRGAREPLITLSRTHPNLVRKLFSLEVPEIADGSVEIVAVAREAG 234 (366)
T ss_dssp CCSSSCEEEEECGGGSCTTCCCCTTCEEEEEEEEEECCSSSCEEEEESSCHHHHHHHHHHHCHHHHTTSEEEEEEEEETT
T ss_pred CCCCCCHHCCCCHHHCCCCCCCCCCCEEEEEEEEEEECCCCCEEEEECCCHHHHHHHHHHHCHHHHCCCEEEEEEECCCC
T ss_conf 77655201139987849976689997699999999985899869998798899999998646786388189999843787
Q ss_pred CEEEEEEEECCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCCCEEE-ECCCCCEEEEEEC
Q ss_conf 503499994089988127655488621788998627782679955987899999762866542489-8756787999985
Q gi|254780788|r 235 SRAKLAVFSSDSSIDPVGACVGMRGSRVQAVVTELRDEKIDIVVWSPDSATFVINALRPAIVTKVV-LDEDVGRIEVIVP 313 (526)
Q Consensus 235 ~RsKIAV~s~d~~iDpVGAcVG~rGsRiq~I~~EL~gEkIDii~ws~d~~~fi~nAl~PA~v~~v~-~de~~~~~~v~v~ 313 (526)
+||||||+|+|++|||||||||+||+|||+|++||+|||||||+||+||++||+|||+||+|.+|. +|++++++.|+||
T Consensus 235 ~RtKVAV~s~d~~iDpvGacvG~~G~Ri~~i~~eL~gEkIDii~~s~d~~~fi~nAl~Pa~v~~v~i~d~~~~~~~v~V~ 314 (366)
T 1k0r_A 235 HRSKIAVRSNVAGLNAKGACIGPMGQRVRNVMSELSGEKIDIIDYDDDPARFVANALSPAKVVSVSVIDQTARAARVVVP 314 (366)
T ss_dssp TEEEEEEEESSTTCCHHHHHHCGGGHHHHHHHHHTTTCEEEEEECCSSHHHHHHHHTTTSCCSEEEEEETTTTEEEEEEC
T ss_pred CCEEEEEEECCCCCCHHHHEECCCCCHHHHHHHHHCCCEEEEEECCCCHHHHHHHHCCCCCEEEEEEECCCCCEEEEEEC
T ss_conf 71479999148974422100035761899999984797379996789999999983797612389987588877999988
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCHHHHHHCCCCCCCCCCCC
Q ss_conf 342211025442789999986167457855220011010012210001112
Q gi|254780788|r 314 KEQLSLAIGRRGQNVRLASQLTGWTIDIITEEEDSINRQKDFNERTQFFMQ 364 (526)
Q Consensus 314 ~~qls~AIGk~GqNvrLas~Ltg~~idi~~~~~~~~~~~~e~~~~~~~f~e 364 (526)
++||||||||+||||||||+||||+|||+|++++.+..+.|......+|++
T Consensus 315 ~~qlslAIGk~G~NvrLaa~Ltg~~IdI~se~~~~~~~~~e~~~~~~~~~~ 365 (366)
T 1k0r_A 315 DFQLSLAIGKEGQNARLAARLTGWRIDIRGDAPPPPPGQPEPGVSRGMAHD 365 (366)
T ss_dssp GGGHHHHHCGGGHHHHHHHHHHCCEEEEEESSCC-----------------
T ss_pred HHHHHHHHCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHCC
T ss_conf 235257637997059999998799689985443544478435678765314