HHsearch results for GI: 254780788 and protein with PDBid: 1z3e_B

>1z3e_B DNA-directed RNA polymerase alpha chain; bacterial transcription regulation, disulfide stress; 1.50A {Bacillus subtilis} SCOP: a.60.3.1 PDB: 3ihq_B

Probab=94.28  E-value=0.07  Score=31.47  Aligned_cols=58  Identities=12%  Similarity=0.239  Sum_probs=46.8

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             1000111225888467888877321114777505888877653058899999999999
Q gi|254780788|r  357 ERTQFFMQAINVDEIIAHLLVAEGFADVEELACVKISEIASIEGFDEETAVEIQGRAR  414 (526)
Q Consensus       357 ~~~~~f~e~LdVDE~iA~~LV~eGf~SiEeIa~a~~eeL~~IeGfdee~a~eL~~rA~  414 (526)
                      .....-++.|+++--....|-.+|+.|+.++...+.++|..+++|.....+|+++.-+
T Consensus         5 ~~L~~~I~~L~LS~R~~N~L~~~~I~tv~dL~~~s~~dLl~i~n~G~kSl~EI~~~L~   62 (73)
T 1z3e_B            5 KVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVKAKLE   62 (73)
T ss_dssp             HHHTCBGGGSCCBHHHHHHHHHTTCCBHHHHHTSCHHHHHTSTTCCHHHHHHHHHHHH
T ss_pred             HHHCCCHHHHCCCHHHHHHHHHCCCCCHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHH
T ss_conf             7626889884698999999989489679999868999997478986605999999999